RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 KRTAP10-1P60331 282 aa10.96□□□□□ -0.65
LINC00404-201ENST00000418660 Q8N814 137 aa10.96□□□□□ -0.65
LINC00404-201ENST00000418660 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.96□□□□□ -0.65
LINC00404-201ENST00000418660 ELOBQ15370 118 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 KCNIP4Q6PIL6 250 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 NUDT10Q8NFP7 164 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 LYPD6BQ8NI32 183 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 NUDT11Q96G61 164 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 COX11Q9Y6N1 276 aa10.95□□□□□ -0.66
LINC00404-201ENST00000418660 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
LINC00404-201ENST00000418660 IGLV5-52A0A0A0MRZ9 124 aa10.94□□□□□ -0.66
LINC00404-201ENST00000418660 RMI2Q96E14 147 aa10.94□□□□□ -0.66
LINC00404-201ENST00000418660 KLK12Q9UKR0 248 aa10.94□□□□□ -0.66
LINC00404-201ENST00000418660 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
LINC00404-201ENST00000418660 LYZL1Q6UWQ5 148 aa10.93□□□□□ -0.66
LINC00404-201ENST00000418660 OCC1Q8TAD7 63 aa10.93□□□□□ -0.66
LINC00404-201ENST00000418660 TMEM262E9PQX1 116 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 TMEM250H0YL14 139 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 H7C1H1 209 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 K7EN84 100 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 MGPP08493 103 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 TRGC1P0CF51 173 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 XGP55808 180 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 WDR73Q6P4I2 378 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 DNAJC30Q96LL9 226 aa10.92□□□□□ -0.66
LINC00404-201ENST00000418660 M0QY20 66 aa10.91□□□□□ -0.66
LINC00404-201ENST00000418660 NTF3P20783 257 aa10.91□□□□□ -0.66
LINC00404-201ENST00000418660 CTRLP40313 264 aa10.91□□□□□ -0.66
LINC00404-201ENST00000418660 WFDC2Q14508 124 aa10.91□□□□□ -0.66
LINC00404-201ENST00000418660 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
LINC00404-201ENST00000418660 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
LINC00404-201ENST00000418660 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
LINC00404-201ENST00000418660 NKX2-5P52952 324 aaPredicted RBP10.9□□□□□ -0.66
LINC00404-201ENST00000418660 PKIAP61925 76 aa10.9□□□□□ -0.66
LINC00404-201ENST00000418660 Q0VG73 95 aa10.9□□□□□ -0.66
LINC00404-201ENST00000418660 SUMO4Q6EEV6 95 aa10.9□□□□□ -0.66
LINC00404-201ENST00000418660 NTM-AS1Q6ZSK4 140 aa10.9□□□□□ -0.66
LINC00404-201ENST00000418660 CHCHD5Q9BSY4 110 aa10.9□□□□□ -0.66
LINC00404-201ENST00000418660 IGKV2D-24A0A075B6R9 120 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 ATRAIDQ6UW56 229 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
LINC00404-201ENST00000418660 LECT2O14960 151 aa10.88□□□□□ -0.67
LINC00404-201ENST00000418660 MPV17L2Q567V2 206 aa10.88□□□□□ -0.67
LINC00404-201ENST00000418660 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
LINC00404-201ENST00000418660 TRBV25-1A0A075B6N4 114 aa10.87□□□□□ -0.67
LINC00404-201ENST00000418660 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
LINC00404-201ENST00000418660 TWIST1Q15672 202 aa10.87□□□□□ -0.67
LINC00404-201ENST00000418660 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
LINC00404-201ENST00000418660 EIF5A2Q9GZV4 153 aaKnown RBP10.87□□□□□ -0.67
LINC00404-201ENST00000418660 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 GATCO43716 136 aaKnown RBP10.86□□□□□ -0.67
LINC00404-201ENST00000418660 CRPP02741 224 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
LINC00404-201ENST00000418660 CEBPGP53567 150 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 ENHOQ6UWT2 76 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 Q8N976 141 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 NIT2Q9NQR4 276 aa10.86□□□□□ -0.67
LINC00404-201ENST00000418660 IGHV1-24A0A0C4DH33 117 aa10.85□□□□□ -0.67
LINC00404-201ENST00000418660 GAGE6Q13070 117 aa10.85□□□□□ -0.67
LINC00404-201ENST00000418660 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
LINC00404-201ENST00000418660 FAM210AQ96ND0 272 aa10.85□□□□□ -0.67
LINC00404-201ENST00000418660 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
LINC00404-201ENST00000418660 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.84□□□□□ -0.67
LINC00404-201ENST00000418660 RBX1P62877 108 aa10.84□□□□□ -0.67
LINC00404-201ENST00000418660 A8MWL6 223 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 MIAQ16674 131 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 FRZBQ92765 325 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 ABCA13Q86UQ4 5058 aa10.83□□□□□ -0.68
LINC00404-201ENST00000418660 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
LINC00404-201ENST00000418660 CT83Q5H943 113 aa10.82□□□□□ -0.68
LINC00404-201ENST00000418660 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
LINC00404-201ENST00000418660 PRR34Q9NV39 138 aa10.82□□□□□ -0.68
LINC00404-201ENST00000418660 FAM30AQ9NZY2 134 aa10.82□□□□□ -0.68
LINC00404-201ENST00000418660 ZNF727A8MUV8 499 aa10.81□□□□□ -0.68
LINC00404-201ENST00000418660 FOXA3P55318 350 aaPredicted RBP10.81□□□□□ -0.68
LINC00404-201ENST00000418660 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
LINC00404-201ENST00000418660 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
LINC00404-201ENST00000418660 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
LINC00404-201ENST00000418660 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
LINC00404-201ENST00000418660 HAMPP81172 84 aa10.8□□□□□ -0.68
LINC00404-201ENST00000418660 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
LINC00404-201ENST00000418660 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
LINC00404-201ENST00000418660 COTL1Q14019 142 aa10.79□□□□□ -0.68
LINC00404-201ENST00000418660 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
LINC00404-201ENST00000418660 Q5VSD8 79 aa10.79□□□□□ -0.68
LINC00404-201ENST00000418660 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
LINC00404-201ENST00000418660 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
LINC00404-201ENST00000418660 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
LINC00404-201ENST00000418660 TEX261Q6UWH6 196 aa10.78□□□□□ -0.68
LINC00404-201ENST00000418660 Q6ZSA8 131 aa10.78□□□□□ -0.68
LINC00404-201ENST00000418660 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms