RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 LGALS1P09382 135 aaKnown RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SCGB1C2P0DMR2 95 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 NBL1P41271 181 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 UBE2D1P51668 147 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 UBE2D3P61077 147 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 UBE2D2P62837 147 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 CCL8P80075 99 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 DIAPH2-AS1Q14236 149 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 KLK9Q2XQG4 91 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SPRNQ5BIV9 151 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 TMEM78Q5T7P6 136 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 ZFAND6Q6FIF0 208 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGFL3Q6UXB1 125 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SCGB1D4Q6XE38 83 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 Q6ZUT4 128 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SBSPONQ8IVN8 264 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 TEX29Q8N6K0 151 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 RNASE6Q93091 150 aaKnown RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 C16orf74Q96GX8 76 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 TMEM141Q96I45 108 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SMIM2Q9BVW6 85 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 FBXL15Q9H469 300 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 DYNLRB1Q9NP97 96 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SPANXCQ9NY87 97 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 ANAPC11Q9NYG5 84 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 C21orf62Q9NYP8 219 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 ZNRD1Q9P1U0 126 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 KLK9Q9UKQ9 250 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 ZFHX2Q9C0A1 2572 aaPredicted RBP1.84□□□□□ -2.12
VPS41-206ENST00000418457 USP24Q9UPU5 2620 aa1.84□□□□□ -2.12
VPS41-206ENST00000418457 AKAP13Q12802 2813 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.83□□□□□ -2.12
VPS41-206ENST00000418457 IGHV3-21A0A0B4J1V1 117 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 TRAV21A0A0B4J279 112 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 A0A0B4J2C4 111 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 LOC107984156A0A0G2JMH3 177 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 A0A1W2PNU3 283 aaPredicted RBP1.83□□□□□ -2.12
VPS41-206ENST00000418457 ZNF815PA8K554 130 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 SMKR1H3BMG3 65 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 LY6LH3BQJ8 138 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 K7ENP7 123 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 M0R1W7 72 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 SNCGO76070 127 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 CD7P09564 240 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 P0DMU3 169 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FAM231AP0DMU4 169 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FAM231CP0DMU5 169 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 CNTFRP26992 372 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 HLA-DMBP28068 263 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 PSMB2P49721 201 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 ZNF80P51504 273 aaPredicted RBP1.83□□□□□ -2.12
VPS41-206ENST00000418457 ERCC8Q13216 396 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 EBI3Q14213 229 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 HES3Q5TGS1 186 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 MINOS1Q5TGZ0 78 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 SPANXN1Q5VSR9 72 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 MORN3Q6PF18 240 aaPredicted RBP1.83□□□□□ -2.12
VPS41-206ENST00000418457 ARL17AQ8IVW1 177 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 C10orf126Q8N4M7 172 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FDCSPQ8NFU4 85 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FAM57AQ8TBR7 257 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 CCL17Q92583 94 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 TIMD4Q96H15 378 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 LINC00477Q96M19 166 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 TIMM17AQ99595 171 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 CITED1Q99966 193 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 ANAPC13Q9BS18 74 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 PRADC1Q9BSG0 188 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 TTTY13Q9BZ97 58 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 PPDPFQ9H3Y8 114 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 DPH3P1Q9H4G8 78 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 UFC1Q9Y3C8 167 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FAM215AQ9Y5M1 114 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 MINOS1-NBL1R4GNA1 71 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 KNTC1P50748 2209 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 FAM186AA6NE01 2351 aa1.83□□□□□ -2.12
VPS41-206ENST00000418457 MALRD1Q5VYJ5 2156 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 NCOR2Q9Y618 2525 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 SDK1Q7Z5N4 2213 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 DMXL2Q8TDJ6 3036 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 TRBV7-1A0A0A6YYK4 115 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 IGHV7-4-1A0A0J9YVY3 117 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 A0A0J9YX75 114 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 FAM240AA0A1B0GVK7 77 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 SDHAF1A6NFY7 115 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 C11orf86A6NJI1 115 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 ODF3BA8MYP8 253 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 H3BT86 120 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 OVOL1O14753 267 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 SLC25A20O43772 301 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 IGHV1-69P01742 117 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 MT-ATP8P03928 68 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 ATP5G1P05496 136 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 CTSGP08311 255 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 COX6CP09669 75 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms