RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ABCA4P78363 2273 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 SMIM9A6NGZ8 99 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 ODF3BA8MYP8 253 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 LYNX1G3V0Z9 82 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 LYNX1P0DP58 116 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 TRBV6-5A0A0K0K1A5 114 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 CLEC19AQ6UXS0 136 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 ZNF580Q9UK33 172 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 PRRC2AP48634 2157 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 E7EQL1 145 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 PRSS2P07478 247 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 NSUN5P1Q3KNT7 163 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 LINC00643Q86TS7 51 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 MUC6Q6W4X9 2439 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 I3L3M4 83 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 IGHV3-30-3P0DP02 117 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 FAM19A4Q96LR4 140 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 ZNF256Q9Y2P7 627 aaPredicted RBP5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 RNASE4P34096 147 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 VMO1Q7Z5L0 202 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 SMCR5Q8TEV8 140 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 LINC00527Q9UJ94 153 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 A0A0J9YXV3 536 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 OVOL1O14753 267 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 RHOHQ15669 191 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 JPT2Q9H910 190 aa5.98□□□□□ -1.45
HMGXB4-202ENST00000418170 ZFHX2Q9C0A1 2572 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 MIAQ16674 131 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 SDIM1Q6ZPB5 146 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 Q6ZSV7 163 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 TMEM61Q8N0U2 210 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 SPXQ9BT56 116 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 GVINP1Q7Z2Y8 2422 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 ADARB2-AS1A8MUL3 147 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 IGF2-ASQ6U949 168 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 DCANP1Q8TF63 244 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 CUBNO60494 3623 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 A0A087WWL8 130 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 TRAV8-3A0A0A6YYJ7 113 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 F5H697 171 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 ECSCRQ19T08 205 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 Q8N9W7 124 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 TIMM21Q9BVV7 248 aa5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 KLK5Q9Y337 293 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-202ENST00000418170 COX7CP15954 63 aa5.96□□□□□ -1.45
HMGXB4-202ENST00000418170 EEF1AKMT3Q96AZ1 226 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 CNOT1A5YKK6 2376 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 IGLV4-3A0A075B6K6 122 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 WIPF1O43516 503 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 CXCL5P42830 114 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 DEFB109BQ30KR1 87 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 C20orf203Q8NBC4 194 aa5.96□□□□□ -1.46
HMGXB4-202ENST00000418170 TRBV7-1A0A0A6YYK4 115 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 M0R1W7 72 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 SOCS3O14543 225 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 CRYGAP11844 174 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 DEFB1P60022 68 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 TMEM219Q86XT9 240 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 EP300Q09472 2414 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 B9A039 149 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 PCNX1Q96RV3 2341 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 UTP20O75691 2785 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 ATP6V0E1O15342 81 aa5.95□□□□□ -1.46
HMGXB4-202ENST00000418170 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 NDUFA12Q9UI09 145 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 IGHV1-58A0A0C4DH39 117 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 M0QY20 66 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 NBL1P41271 181 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 MRPS36P82909 103 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 AKAP9Q99996 3911 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 NPC2P61916 151 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 IGFL3Q6UXB1 125 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 OR13C6PQ8NH95 151 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 PEMTQ9UBM1 199 aa5.94□□□□□ -1.46
HMGXB4-202ENST00000418170 CFAP46Q8IYW2 2715 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 F6UB75 175 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 FAM74A4Q5TZK3 123 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 DUX5Q96PT3 197 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 G3V318 75 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 CEP295Q9C0D2 2601 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 KLLNB2CW77 178 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 RPL11P62913 178 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 MINOS1Q5TGZ0 78 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 VSIG2Q96IQ7 327 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 EDA2RQ9HAV5 297 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 MINOS1-NBL1R4GNA1 71 aa5.93□□□□□ -1.46
HMGXB4-202ENST00000418170 CACNA1BQ00975 2339 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 TRAV25A0A0B4J276 109 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 TIMM17BO60830 172 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 DEFB124Q8NES8 71 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 CITED2Q99967 270 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms