RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 H2AFB1P0C5Y9 115 aa14.21□□□□□ -0.13
ACTB-203ENST00000417101 OR5AL1P0C617 328 aa14.21□□□□□ -0.13
ACTB-203ENST00000417101 TMUB2Q71RG4 321 aa14.21□□□□□ -0.13
ACTB-203ENST00000417101 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.21□□□□□ -0.13
ACTB-203ENST00000417101 HMSDA8MTL9 139 aa14.2□□□□□ -0.14
ACTB-203ENST00000417101 C14orf177Q52M58 125 aa14.2□□□□□ -0.14
ACTB-203ENST00000417101 CIRBP-AS1Q8TBR5 109 aa14.2□□□□□ -0.14
ACTB-203ENST00000417101 A0A0D9SG52 128 aa14.19□□□□□ -0.14
ACTB-203ENST00000417101 KANTRA0A1W2PQU2 76 aa14.19□□□□□ -0.14
ACTB-203ENST00000417101 BCL2L11O43521 198 aa14.19□□□□□ -0.14
ACTB-203ENST00000417101 KRTAP29-1A8MX34 341 aaPredicted RBP14.18□□□□□ -0.14
ACTB-203ENST00000417101 SMIM17P0DL12 118 aa14.18□□□□□ -0.14
ACTB-203ENST00000417101 RPL35P42766 123 aaKnown RBP14.18□□□□□ -0.14
ACTB-203ENST00000417101 NTM-AS1Q6ZSK4 140 aa14.18□□□□□ -0.14
ACTB-203ENST00000417101 LRP1Q07954 4544 aaKnown RBP14.18□□□□□ -0.14
ACTB-203ENST00000417101 PKIAP61925 76 aa14.17□□□□□ -0.14
ACTB-203ENST00000417101 AP1S3Q96PC3 154 aa14.17□□□□□ -0.14
ACTB-203ENST00000417101 DERL1Q9BUN8 251 aa14.17□□□□□ -0.14
ACTB-203ENST00000417101 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
ACTB-203ENST00000417101 KIF25-AS1Q9Y6Z4 181 aa14.17□□□□□ -0.14
ACTB-203ENST00000417101 USP17L23D6RBM5 183 aa14.16□□□□□ -0.14
ACTB-203ENST00000417101 HLA-DQA1P01909 254 aa14.16□□□□□ -0.14
ACTB-203ENST00000417101 TMEM97Q5BJF2 176 aa14.16□□□□□ -0.14
ACTB-203ENST00000417101 EIF5AP63241 154 aaKnown RBP14.15□□□□□ -0.14
ACTB-203ENST00000417101 CCL20P78556 96 aa14.15□□□□□ -0.14
ACTB-203ENST00000417101 MIAQ16674 131 aa14.15□□□□□ -0.14
ACTB-203ENST00000417101 GNG13Q9P2W3 67 aa14.15□□□□□ -0.14
ACTB-203ENST00000417101 GZMBP10144 247 aa14.14□□□□□ -0.15
ACTB-203ENST00000417101 KRTAP10-4P60372 401 aaPredicted RBP14.14□□□□□ -0.15
ACTB-203ENST00000417101 RBX1P62877 108 aa14.14□□□□□ -0.15
ACTB-203ENST00000417101 GAGE6Q13070 117 aa14.14□□□□□ -0.15
ACTB-203ENST00000417101 CLPSL2Q6UWE3 100 aa14.14□□□□□ -0.15
ACTB-203ENST00000417101 TPPP3Q9BW30 176 aa14.14□□□□□ -0.15
ACTB-203ENST00000417101 C11orf52Q96A22 123 aa14.13□□□□□ -0.15
ACTB-203ENST00000417101 MANBALQ9NQG1 85 aa14.13□□□□□ -0.15
ACTB-203ENST00000417101 FAT3Q8TDW7 4589 aa14.13□□□□□ -0.15
ACTB-203ENST00000417101 TRBV25-1A0A075B6N4 114 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 IGLV2-8P01709 118 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 MGPP08493 103 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 CENPWQ5EE01 88 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 LINC00269Q8N2A0 174 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 PRR34Q9NV39 138 aa14.12□□□□□ -0.15
ACTB-203ENST00000417101 PRSS1P07477 247 aa14.11□□□□□ -0.15
ACTB-203ENST00000417101 FER1L6-AS1Q8NA97 138 aa14.11□□□□□ -0.15
ACTB-203ENST00000417101 OR2D3Q8NGH3 330 aa14.11□□□□□ -0.15
ACTB-203ENST00000417101 DAZAP1Q96EP5 407 aaKnown RBP14.11□□□□□ -0.15
ACTB-203ENST00000417101 M0QY20 66 aa14.1□□□□□ -0.15
ACTB-203ENST00000417101 IGLC6P0CF74 106 aa14.1□□□□□ -0.15
ACTB-203ENST00000417101 IGHV1-24A0A0C4DH33 117 aa14.09□□□□□ -0.15
ACTB-203ENST00000417101 RPS20P60866 119 aaKnown RBP14.09□□□□□ -0.15
ACTB-203ENST00000417101 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
ACTB-203ENST00000417101 KRTAP26-1Q6PEX3 210 aa14.09□□□□□ -0.15
ACTB-203ENST00000417101 PKHD1L1Q86WI1 4243 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 TRAV1-1A0A0B4J248 108 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 RAB19A4D1S5 217 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 H7C1H1 209 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 SUMO4Q6EEV6 95 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 DGAT2L7PQ6IED9 249 aa14.08□□□□□ -0.16
ACTB-203ENST00000417101 C19orf71A6NCJ1 209 aa14.07□□□□□ -0.16
ACTB-203ENST00000417101 CACNG7P62955 275 aa14.07□□□□□ -0.16
ACTB-203ENST00000417101 GNG4P50150 75 aa14.06□□□□□ -0.16
ACTB-203ENST00000417101 RAB5CP51148 216 aa14.06□□□□□ -0.16
ACTB-203ENST00000417101 C9orf163Q8N9P6 203 aa14.06□□□□□ -0.16
ACTB-203ENST00000417101 IGLV10-54A0A075B6I4 117 aa14.05□□□□□ -0.16
ACTB-203ENST00000417101 TEX46H3BTG2 121 aa14.05□□□□□ -0.16
ACTB-203ENST00000417101 NKX2-5P52952 324 aaPredicted RBP14.05□□□□□ -0.16
ACTB-203ENST00000417101 REG3AQ06141 175 aa14.05□□□□□ -0.16
ACTB-203ENST00000417101 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
ACTB-203ENST00000417101 P01737 135 aa14.04□□□□□ -0.16
ACTB-203ENST00000417101 RPL37AP61513 92 aaKnown RBP14.04□□□□□ -0.16
ACTB-203ENST00000417101 SMIM12Q96EX1 92 aa14.04□□□□□ -0.16
ACTB-203ENST00000417101 HMCN2Q8NDA2 5059 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 F2Z2F3 143 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 MEF2BQ02080 365 aaPredicted RBP14.03□□□□□ -0.16
ACTB-203ENST00000417101 EIF5AL1Q6IS14 154 aaKnown RBP14.03□□□□□ -0.16
ACTB-203ENST00000417101 RASL11AQ6T310 242 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 LYZL1Q6UWQ5 148 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 C20orf203Q8NBC4 194 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
ACTB-203ENST00000417101 TRBV20OR9-2A0A075B6H5 130 aa14.02□□□□□ -0.17
ACTB-203ENST00000417101 PDE6DO43924 150 aa14.02□□□□□ -0.17
ACTB-203ENST00000417101 OXTP01178 125 aa14.02□□□□□ -0.17
ACTB-203ENST00000417101 IFNA1P01562 189 aa14.02□□□□□ -0.17
ACTB-203ENST00000417101 MED9Q9NWA0 146 aa14.02□□□□□ -0.17
ACTB-203ENST00000417101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.02□□□□□ -0.17
ACTB-203ENST00000417101 TRGC1P0CF51 173 aa14.01□□□□□ -0.17
ACTB-203ENST00000417101 SULT1A2P50226 295 aa14.01□□□□□ -0.17
ACTB-203ENST00000417101 CLRN3Q8NCR9 226 aa14.01□□□□□ -0.17
ACTB-203ENST00000417101 IGLV4-60A0A075B6I1 120 aa14□□□□□ -0.17
ACTB-203ENST00000417101 PANO1I0J062 215 aa14□□□□□ -0.17
ACTB-203ENST00000417101 NTF3P20783 257 aa14□□□□□ -0.17
ACTB-203ENST00000417101 SDIM1Q6ZPB5 146 aa14□□□□□ -0.17
ACTB-203ENST00000417101 GFRA4Q9GZZ7 299 aa14□□□□□ -0.17
ACTB-203ENST00000417101 DPH3P1Q9H4G8 78 aa14□□□□□ -0.17
ACTB-203ENST00000417101 NIT2Q9NQR4 276 aa14□□□□□ -0.17
ACTB-203ENST00000417101 TRAV8-4A0A0B4J246 113 aa13.99□□□□□ -0.17
ACTB-203ENST00000417101 A0A1B0GUV1 79 aa13.99□□□□□ -0.17
ACTB-203ENST00000417101 BIN3Q9NQY0 253 aa13.99□□□□□ -0.17
ACTB-203ENST00000417101 hDV102S1A0JD36 115 aa13.98□□□□□ -0.17
ACTB-203ENST00000417101 BCL2P10415 239 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms