RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 PARP4Q9UKK3 1724 aaKnown RBP3.59□□□□□ -1.83
TTC39DP-201ENST00000416781 IGKV2D-26A0A0A0MRZ7 120 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C17orf51A8MQB3 221 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C5orf67F2Z3F1 127 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 MIAQ16674 131 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 C15orf32Q32M92 178 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 IFI27L1Q96BM0 104 aa3.59□□□□□ -1.84
TTC39DP-201ENST00000416781 COL11A1P12107 1806 aaPredicted RBP3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV7-3A0A075B6L6 115 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A0B4J2C4 111 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 hDV103S1A0JD37 113 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 A8MWP4 228 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 HCG22E2RYF7 251 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 HMGN2P05204 90 aaKnown RBP3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ROMO1P60602 79 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 NDUFA11Q86Y39 141 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 C20orf203Q8NBC4 194 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 SHROOM3Q8TF72 1996 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 SPTBP11277 2137 aa3.58□□□□□ -1.84
TTC39DP-201ENST00000416781 BRWD3Q6RI45 1802 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 LTBP4Q8N2S1 1624 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 NRXN3Q9Y4C0 1643 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV3-66A0A0C4DH42 116 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A1B0GWA3 101 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 K7ERS5 55 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 LECT2O14960 151 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF117Q03924 483 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 C9orf116Q5BN46 136 aaPredicted RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF826PQ6ZT77 177 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 FAM167A-AS1Q96KT0 104 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SMIM7Q9BQ49 75 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 CHCHD7Q9BUK0 85 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 PROK2Q9HC23 129 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 MDC1Q14676 2089 aaKnown RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SAMD9LQ8IVG5 1584 aa3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 COL2A1P02458 1487 aaPredicted RBP3.57□□□□□ -1.84
TTC39DP-201ENST00000416781 SHPRHQ149N8 1683 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV3-49A0A0A0MS15 119 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 LY6HO94772 140 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 ABRACLQ9P1F3 81 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 SDK2Q58EX2 2172 aa3.56□□□□□ -1.84
TTC39DP-201ENST00000416781 KIAA0100Q14667 2235 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGLV3-32A0A0A0MS00 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV5-10-1A0A0J9YXX1 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 E7EUB6 86 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 PRH1P02810 166 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 MIFP14174 115 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SSBP1Q04837 148 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 C1orf134Q5TEV5 83 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q6JHZ5 121 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 DYNAPQ8N1N2 210 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q8N377 158 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q8N6K4 173 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 GNG13Q9P2W3 67 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 TMSB15BA0A087X1C1 80 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 BPY2O14599 106 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGKV1D-33P01593 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 IGKV1-33P01594 117 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 MSMBP08118 114 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 Q5VV11 94 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 SIP14410 1827 aa3.55□□□□□ -1.84
TTC39DP-201ENST00000416781 LRP5O75197 1615 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 TEX49A0A1B0GTD5 131 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 A6NED7 52 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 F8WEM9 126 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 SH2D1AO60880 128 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 LTBP1Q14766 1721 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 DDX60LQ5H9U9 1706 aaKnown RBP3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
TTC39DP-201ENST00000416781 MALRD1Q5VYJ5 2156 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 TMEM30CPA0ZSE6 113 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 TRGV3P03979 118 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CLPSP04118 112 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 IGHV1-8P0DP01 117 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 ZCCHC23Q6ZST2 131 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CLECL1Q8IZS7 167 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
TTC39DP-201ENST00000416781 CEBPZOSA8MTT3 80 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 H3BVH4 76 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 LEPROTL1O95214 131 aa3.52□□□□□ -1.85
TTC39DP-201ENST00000416781 IFI27P40305 119 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms