RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 C9orf153Q5TBE3 101 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 UTF1Q5T230 341 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
PHRF1-203ENST00000416188 DEFB125Q8N687 156 aa11.93□□□□□ -0.5
PHRF1-203ENST00000416188 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
PHRF1-203ENST00000416188 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
PHRF1-203ENST00000416188 LRRK2Q5S007 2527 aa11.93□□□□□ -0.5
PHRF1-203ENST00000416188 C1orf43Q9BWL3 253 aa11.92□□□□□ -0.5
PHRF1-203ENST00000416188 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
PHRF1-203ENST00000416188 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
PHRF1-203ENST00000416188 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
PHRF1-203ENST00000416188 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
PHRF1-203ENST00000416188 FRMD6-AS1P0C7T7 363 aa11.91□□□□□ -0.5
PHRF1-203ENST00000416188 RPL39P62891 51 aaKnown RBP11.91□□□□□ -0.5
PHRF1-203ENST00000416188 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
PHRF1-203ENST00000416188 K7EQD1 137 aa11.91□□□□□ -0.5
PHRF1-203ENST00000416188 UBE2BP63146 152 aa11.91□□□□□ -0.5
PHRF1-203ENST00000416188 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 IGLL5B9A064 214 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 LINC01006Q8NI28 216 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
PHRF1-203ENST00000416188 RS1O15537 224 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
PHRF1-203ENST00000416188 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.5
PHRF1-203ENST00000416188 PROP1O75360 226 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGF1P05019 195 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 HERV-K104P63124 156 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 DEFB105AQ8NG35 78 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 BAALC-AS2P0C853 105 aa11.88□□□□□ -0.51
PHRF1-203ENST00000416188 ZNF295-AS1Q8N0V1 137 aa11.87□□□□□ -0.51
PHRF1-203ENST00000416188 ABCA12Q86UK0 2595 aa11.87□□□□□ -0.51
PHRF1-203ENST00000416188 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
PHRF1-203ENST00000416188 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
PHRF1-203ENST00000416188 CAMK2N2Q96S95 79 aa11.87□□□□□ -0.51
PHRF1-203ENST00000416188 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
PHRF1-203ENST00000416188 LINC00574Q9H8X3 128 aa11.87□□□□□ -0.51
PHRF1-203ENST00000416188 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
PHRF1-203ENST00000416188 A4D1N5 150 aa11.86□□□□□ -0.51
PHRF1-203ENST00000416188 CRYBA4P53673 196 aa11.86□□□□□ -0.51
PHRF1-203ENST00000416188 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
PHRF1-203ENST00000416188 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
PHRF1-203ENST00000416188 PRSS47A8MTI9 375 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 SND1-IT1Q9HBX3 110 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 COX7A2LO14548 114 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 SPATA25Q9BR10 227 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 DAND5Q8N907 189 aa11.85□□□□□ -0.51
PHRF1-203ENST00000416188 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 C11orf1Q9H5F2 150 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 IFITM1P13164 125 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 CTRLP40313 264 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 Q6ZPA2 131 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 C15orf53Q8NAA6 179 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 MDFICQ9P1T7 246 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 PCNX3Q9H6A9 2034 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 RPL18AQ02543 176 aaKnown RBP11.84□□□□□ -0.51
PHRF1-203ENST00000416188 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
PHRF1-203ENST00000416188 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.51
PHRF1-203ENST00000416188 CENPFP49454 3210 aa11.83□□□□□ -0.51
PHRF1-203ENST00000416188 BRWD1-AS2P59051 145 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 LRP4O75096 1905 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 P0C879 139 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 CCDC140Q96MF4 163 aa11.83□□□□□ -0.52
PHRF1-203ENST00000416188 ZNF702PQ9H963 129 aa11.82□□□□□ -0.52
PHRF1-203ENST00000416188 FXYD2P54710 66 aa11.82□□□□□ -0.52
PHRF1-203ENST00000416188 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
PHRF1-203ENST00000416188 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
PHRF1-203ENST00000416188 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
PHRF1-203ENST00000416188 A0A0J9YX75 114 aa11.82□□□□□ -0.52
PHRF1-203ENST00000416188 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 NUP210LQ5VU65 1888 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 A0A1W2PPR1 153 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 ETDCA0A1B0GVM5 59 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 AVPP01185 164 aa11.81□□□□□ -0.52
PHRF1-203ENST00000416188 DEFB114Q30KQ6 69 aa11.8□□□□□ -0.52
PHRF1-203ENST00000416188 EBI3Q14213 229 aa11.8□□□□□ -0.52
PHRF1-203ENST00000416188 TOMM6Q96B49 74 aa11.8□□□□□ -0.52
PHRF1-203ENST00000416188 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
PHRF1-203ENST00000416188 LINC00482Q8N8I6 264 aa11.8□□□□□ -0.52
PHRF1-203ENST00000416188 RNF183Q96D59 192 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms