RNA–Protein interactions for RNA: ENST00000415858.3

CT47A4-201, Transcript of cancer/testis antigen family 47, member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A4, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A4-201ENST00000415858 UBE2D3P61077 147 aa12.78□□□□□ -0.36
CT47A4-201ENST00000415858 UBE2D2P62837 147 aa12.78□□□□□ -0.36
CT47A4-201ENST00000415858 RHEBQ15382 184 aa12.78□□□□□ -0.36
CT47A4-201ENST00000415858 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
CT47A4-201ENST00000415858 Q9H8V8 135 aa12.78□□□□□ -0.36
CT47A4-201ENST00000415858 TMEM97Q5BJF2 176 aa12.77□□□□□ -0.37
CT47A4-201ENST00000415858 LELP1Q5T871 98 aa12.77□□□□□ -0.37
CT47A4-201ENST00000415858 DAZ4Q86SG3 579 aaKnown RBP12.77□□□□□ -0.37
CT47A4-201ENST00000415858 NIT2Q9NQR4 276 aa12.77□□□□□ -0.37
CT47A4-201ENST00000415858 DAZ3Q9NR90 486 aaKnown RBP12.77□□□□□ -0.37
CT47A4-201ENST00000415858 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.37
CT47A4-201ENST00000415858 TRAV8-6A0A0B4J262 113 aa12.76□□□□□ -0.37
CT47A4-201ENST00000415858 HBBP68871 147 aa12.76□□□□□ -0.37
CT47A4-201ENST00000415858 Q9UF83 564 aa12.76□□□□□ -0.37
CT47A4-201ENST00000415858 VPS13DQ5THJ4 4388 aa12.76□□□□□ -0.37
CT47A4-201ENST00000415858 TRAV9-1A0A075B6T8 112 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 SIVA1O15304 175 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 SVBPQ8N300 66 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 CLRN3Q8NCR9 226 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 BTF3L4Q96K17 158 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 BIRC6Q9NR09 4857 aa12.75□□□□□ -0.37
CT47A4-201ENST00000415858 SACSQ9NZJ4 4579 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 C7orf77A4D0Y5 90 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 PPP1R17O96001 155 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
CT47A4-201ENST00000415858 SNAPINO95295 136 aa12.73□□□□□ -0.37
CT47A4-201ENST00000415858 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
CT47A4-201ENST00000415858 RAB4AP20338 218 aa12.73□□□□□ -0.37
CT47A4-201ENST00000415858 CAMPP49913 170 aa12.73□□□□□ -0.37
CT47A4-201ENST00000415858 FAM104BQ5XKR9 115 aa12.73□□□□□ -0.37
CT47A4-201ENST00000415858 TRAV9-2A0A087WT02 112 aa12.72□□□□□ -0.37
CT47A4-201ENST00000415858 NBDYA0A0U1RRE5 68 aa12.72□□□□□ -0.37
CT47A4-201ENST00000415858 APOC3P02656 99 aa12.72□□□□□ -0.37
CT47A4-201ENST00000415858 S100PP25815 95 aa12.72□□□□□ -0.37
CT47A4-201ENST00000415858 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
CT47A4-201ENST00000415858 DNAH10OSP0CZ25 163 aa12.71□□□□□ -0.37
CT47A4-201ENST00000415858 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.37
CT47A4-201ENST00000415858 Q6ZR54 194 aa12.71□□□□□ -0.37
CT47A4-201ENST00000415858 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
CT47A4-201ENST00000415858 RNF185Q96GF1 192 aa12.71□□□□□ -0.37
CT47A4-201ENST00000415858 EPPK1P58107 5090 aaKnown RBP12.7□□□□□ -0.38
CT47A4-201ENST00000415858 TRBV6-5A0A0K0K1A5 114 aa12.7□□□□□ -0.38
CT47A4-201ENST00000415858 RYR2Q92736 4967 aa12.7□□□□□ -0.38
CT47A4-201ENST00000415858 TRBV6-8A0A0A6YYG3 113 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 PPBPP02775 128 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 PKIAP61925 76 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 RPS10P5Q9NQ39 176 aa12.69□□□□□ -0.38
CT47A4-201ENST00000415858 IGLV2-18A0A075B6J9 118 aa12.68□□□□□ -0.38
CT47A4-201ENST00000415858 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
CT47A4-201ENST00000415858 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
CT47A4-201ENST00000415858 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
CT47A4-201ENST00000415858 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
CT47A4-201ENST00000415858 COX19Q49B96 90 aa12.66□□□□□ -0.38
CT47A4-201ENST00000415858 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
CT47A4-201ENST00000415858 ST20Q9HBF5 79 aa12.66□□□□□ -0.38
CT47A4-201ENST00000415858 NCR2O95944 276 aa12.65□□□□□ -0.38
CT47A4-201ENST00000415858 CKS2P33552 79 aa12.65□□□□□ -0.38
CT47A4-201ENST00000415858 COTL1Q14019 142 aa12.65□□□□□ -0.38
CT47A4-201ENST00000415858 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CT47A4-201ENST00000415858 SLC7A5P1Q8MH63 180 aa12.65□□□□□ -0.38
CT47A4-201ENST00000415858 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
CT47A4-201ENST00000415858 KMT2AQ03164 3969 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 TRBV24-1A0A075B6N3 115 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 M0R2N4 97 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 PHOX2AO14813 284 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 DNAH6Q9C0G6 4158 aa12.64□□□□□ -0.39
CT47A4-201ENST00000415858 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
CT47A4-201ENST00000415858 NIT1Q86X76 327 aa12.63□□□□□ -0.39
CT47A4-201ENST00000415858 LAMTOR2Q9Y2Q5 125 aa12.63□□□□□ -0.39
CT47A4-201ENST00000415858 TRBV27A0A0K0K1C4 114 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 I3L3M4 83 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 VCYO14598 125 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
CT47A4-201ENST00000415858 RPL32P62910 135 aaKnown RBP12.62□□□□□ -0.39
CT47A4-201ENST00000415858 C1orf134Q5TEV5 83 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 NRACQ8N912 160 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
CT47A4-201ENST00000415858 A0A087WX48 190 aa12.61□□□□□ -0.39
CT47A4-201ENST00000415858 PMCHP20382 165 aa12.61□□□□□ -0.39
CT47A4-201ENST00000415858 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
CT47A4-201ENST00000415858 ELOBQ15370 118 aa12.61□□□□□ -0.39
CT47A4-201ENST00000415858 TCAPO15273 167 aa12.6□□□□□ -0.39
CT47A4-201ENST00000415858 HLA-DQA1P01909 254 aa12.6□□□□□ -0.39
CT47A4-201ENST00000415858 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
CT47A4-201ENST00000415858 LAGE3Q14657 143 aa12.6□□□□□ -0.39
CT47A4-201ENST00000415858 TMEM136Q6ZRR5 245 aa12.6□□□□□ -0.39
CT47A4-201ENST00000415858 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms