RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PSENENQ9NZ42 101 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 DHRS4-AS1Q9P1J3 65 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 LAMB2P55268 1798 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 PTPRBP23467 1997 aa2.45□□□□□ -2.02
SF3B1-203ENST00000414174 ZFC3H1O60293 1989 aaKnown RBP2.44□□□□□ -2.02
SF3B1-203ENST00000414174 ARHGAP21Q5T5U3 1957 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV3-15A0A0B4J1V0 119 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV5-10-1A0A0J9YXX1 117 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 A8MWP4 228 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 SMIM1B2RUZ4 78 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV1-8P0DP01 117 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 CD24P25063 80 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 RPL28P46779 137 aaKnown RBP2.44□□□□□ -2.02
SF3B1-203ENST00000414174 SERF2P84101 59 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 MOBPQ13875 183 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 KLF14Q8TD94 323 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-203ENST00000414174 TMEM14BQ9NUH8 114 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 DEC1Q9P2X7 70 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 PLXNB3Q9ULL4 1909 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 DOCK7Q96N67 2140 aa2.44□□□□□ -2.02
SF3B1-203ENST00000414174 ATAD5Q96QE3 1844 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 LOC101927531A0A1B0GV80 90 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 ZNF815PA8K554 130 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 CLPSP04118 112 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 EDDM3BP56851 147 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 IGLV3-21P80748 117 aaPredicted RBP2.43□□□□□ -2.02
SF3B1-203ENST00000414174 RPP21Q9H633 154 aaKnown RBP2.43□□□□□ -2.02
SF3B1-203ENST00000414174 CDC42SE2Q9NRR3 84 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 S4R3C0 116 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 TANC2Q9HCD6 1990 aa2.43□□□□□ -2.02
SF3B1-203ENST00000414174 THADAQ6YHU6 1953 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 A0A087WSZ3 146 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV3-73A0A0B4J1V6 119 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 A0A1B0GVX0 72 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 SMIM27A0A1W2PRY6 76 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 A6NDX4 124 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 A6NED7 52 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 CHKB-CPT1BH3BT56 60 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 H7C423 109 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 WISP3O95389 354 aaPredicted RBP2.42□□□□□ -2.02
SF3B1-203ENST00000414174 IGKV1D-33P01593 117 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 IGKV1-33P01594 117 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV1-46P01743 117 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 CRPP02741 224 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 MGST1P10620 155 aaKnown RBP2.42□□□□□ -2.02
SF3B1-203ENST00000414174 HMGA1P17096 107 aaKnown RBP2.42□□□□□ -2.02
SF3B1-203ENST00000414174 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 Q6ZQT0 140 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 Q8N9W7 124 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 LINC01560Q8TB33 94 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 FGF22Q9HCT0 170 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 V9GYV3 84 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 LY75O60449 1722 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 NRXN3Q9Y4C0 1643 aa2.42□□□□□ -2.02
SF3B1-203ENST00000414174 DSCAMO60469 2012 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 IGLV3-16A0A075B6K0 115 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 TRBV6-8A0A0A6YYG3 113 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 C10orf142B7Z368 130 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 PRAC2D3DTV9 90 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 LHBP01229 141 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 IGLV2-11P01706 119 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 TRGV3P03979 118 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 S100A3P33764 101 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 EIF4EBP1Q13541 118 aaPredicted RBP2.41□□□□□ -2.02
SF3B1-203ENST00000414174 Q6ZR03 302 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 ZNF525Q8N782 197 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 C15orf56Q8N910 161 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 C1orf64Q8NEQ6 169 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 MUC7Q8TAX7 377 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 TIMM9Q9Y5J7 89 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 NHSL1Q5SYE7 1610 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 MGAMO43451 1857 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 SHPRHQ149N8 1683 aa2.41□□□□□ -2.02
SF3B1-203ENST00000414174 MYO9BQ13459 2157 aa2.4□□□□□ -2.02
SF3B1-203ENST00000414174 ZNF236Q9UL36 1845 aa2.4□□□□□ -2.02
SF3B1-203ENST00000414174 ANKRD12Q6UB98 2062 aa2.4□□□□□ -2.02
SF3B1-203ENST00000414174 IGHV1-3A0A0C4DH29 117 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 TRBV7-4A0A0J9YYF1 115 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 CXorf51AA0A1B0GTR3 108 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 A8MU10 97 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 PSCAO43653 123 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 CFC1BP0CG36 223 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 CFC1P0CG37 223 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 SFTA2Q6UW10 78 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 LYZL1Q6UWQ5 148 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 LYZL2Q7Z4W2 148 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 LINC01006Q8NI28 216 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 CYYR1Q96J86 154 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 C14orf132Q9NPU4 83 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 C22orf24Q9Y442 160 aa2.4□□□□□ -2.03
SF3B1-203ENST00000414174 GBF1Q92538 1859 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 TRPM6Q9BX84 2022 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 IGLV11-55A0A075B6I3 123 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 TRAV23DV6A0A075B6W5 121 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 CTXND1A0A1B0GTU2 59 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 J3QRE1 110 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 ARMS2P0C7Q2 107 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms