RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RYR1P21817 5038 aa12.65□□□□□ -0.38
TRIM56-202ENST00000412507 MGPP08493 103 aa12.65□□□□□ -0.38
TRIM56-202ENST00000412507 EREGO14944 169 aa12.64□□□□□ -0.39
TRIM56-202ENST00000412507 A0A087WTM6 91 aa12.63□□□□□ -0.39
TRIM56-202ENST00000412507 SRP19P09132 144 aaKnown RBP12.63□□□□□ -0.39
TRIM56-202ENST00000412507 NTF3P20783 257 aa12.63□□□□□ -0.39
TRIM56-202ENST00000412507 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
TRIM56-202ENST00000412507 SMIM7Q9BQ49 75 aa12.63□□□□□ -0.39
TRIM56-202ENST00000412507 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
TRIM56-202ENST00000412507 PSCAO43653 123 aa12.62□□□□□ -0.39
TRIM56-202ENST00000412507 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
TRIM56-202ENST00000412507 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
TRIM56-202ENST00000412507 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■□□□ 12
TRIM56-202ENST00000412507 CTRLP40313 264 aa12.62□□□□□ -0.39
TRIM56-202ENST00000412507 LAGE3Q14657 143 aa12.62□□□□□ -0.39
TRIM56-202ENST00000412507 NIT1Q86X76 327 aa12.62□□□□□ -0.39
TRIM56-202ENST00000412507 SRSF3P84103 164 aaKnown RBP12.61□□□□□ -0.39
TRIM56-202ENST00000412507 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
TRIM56-202ENST00000412507 WDR73Q6P4I2 378 aa12.61□□□□□ -0.39
TRIM56-202ENST00000412507 FAM231DQ6ZW35 169 aa12.61□□□□□ -0.39
TRIM56-202ENST00000412507 URGCP-MRPS24S4R325 110 aa12.61□□□□□ -0.39
TRIM56-202ENST00000412507 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
TRIM56-202ENST00000412507 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
TRIM56-202ENST00000412507 KRTAP17-1Q9BYP8 105 aa12.6□□□□□ -0.39
TRIM56-202ENST00000412507 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
TRIM56-202ENST00000412507 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
TRIM56-202ENST00000412507 M0QY20 66 aa12.59□□□□□ -0.39
TRIM56-202ENST00000412507 TWIST1Q15672 202 aa12.59□□□□□ -0.39
TRIM56-202ENST00000412507 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.59□□□□□ -0.39
TRIM56-202ENST00000412507 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
TRIM56-202ENST00000412507 H7C1H1 209 aa12.58□□□□□ -0.4
TRIM56-202ENST00000412507 FAM74A3Q4VXF1 159 aa12.58□□□□□ -0.4
TRIM56-202ENST00000412507 LINC01551Q86U37 167 aa12.58□□□□□ -0.4
TRIM56-202ENST00000412507 PGPEP1Q9NXJ5 209 aa12.58□□□□□ -0.4
TRIM56-202ENST00000412507 A0A087WX48 190 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 TRAV8-3A0A0A6YYJ7 113 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 LRCOL1A6NCL2 159 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 A8MWL6 223 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 C9JQL5 133 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
TRIM56-202ENST00000412507 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
TRIM56-202ENST00000412507 TMEM218A2RU14 115 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 KCNIP4Q6PIL6 250 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
TRIM56-202ENST00000412507 TMEM262E9PQX1 116 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 TMEM97Q5BJF2 176 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 CT83Q5H943 113 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 CDPF1Q6NVV7 123 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
TRIM56-202ENST00000412507 HSPG2P98160 4391 aa12.54□□□□□ -0.4
TRIM56-202ENST00000412507 SLC7A5P1Q8MH63 180 aa12.54□□□□□ -0.4
TRIM56-202ENST00000412507 CHCHD5Q9BSY4 110 aa12.54□□□□□ -0.4
TRIM56-202ENST00000412507 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
TRIM56-202ENST00000412507 ELOBQ15370 118 aa12.53□□□□□ -0.4
TRIM56-202ENST00000412507 MPV17L2Q567V2 206 aa12.53□□□□□ -0.4
TRIM56-202ENST00000412507 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
TRIM56-202ENST00000412507 NIT2Q9NQR4 276 aa12.53□□□□□ -0.4
TRIM56-202ENST00000412507 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
TRIM56-202ENST00000412507 F8W036 122 aa12.52□□□□□ -0.41
TRIM56-202ENST00000412507 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.41
TRIM56-202ENST00000412507 SEC11CQ9BY50 192 aa12.52□□□□□ -0.41
TRIM56-202ENST00000412507 NAT8Q9UHE5 227 aa12.52□□□□□ -0.41
TRIM56-202ENST00000412507 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
TRIM56-202ENST00000412507 WFDC2Q14508 124 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 TSKUQ8WUA8 353 aa12.51□□□□□ -0.41
TRIM56-202ENST00000412507 IGKV2D-24A0A075B6R9 120 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 GAGE6Q13070 117 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 ATRAIDQ6UW56 229 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 Q8N814 137 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 MAPKAPK5-AS1Q8N8E1 139 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 C15orf54Q8N8G6 183 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 ISOC2Q96AB3 205 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 RMI2Q96E14 147 aa12.5□□□□□ -0.41
TRIM56-202ENST00000412507 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 HIGD1CA8MV81 97 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 LECT2O14960 151 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 PKIAP61925 76 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 ADIRFQ15847 76 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 IQCJQ1A5X6 159 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 Q8N976 141 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 V9GYV3 84 aa12.49□□□□□ -0.41
TRIM56-202ENST00000412507 ANGP03950 147 aaKnown RBP12.48□□□□□ -0.41
TRIM56-202ENST00000412507 PNRC1Q12796 327 aaPredicted RBP12.48□□□□□ -0.41
TRIM56-202ENST00000412507 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
TRIM56-202ENST00000412507 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
TRIM56-202ENST00000412507 IGLV5-52A0A0A0MRZ9 124 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms