RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 DPH3P1Q9H4G8 78 aa21.06■□□□□ 0.96
TRAF3IP1-203ENST00000409739 NAT8Q9UHE5 227 aa21.05■□□□□ 0.96
TRAF3IP1-203ENST00000409739 IGHV3-30P01768 117 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 IGHV3-33P01772 117 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 IGHV3-30-3P0DP02 117 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 IGHV3-30-5P0DP03 117 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 Q8N3U1 123 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 PGLYRP4Q96LB8 373 aa21.04■□□□□ 0.96
TRAF3IP1-203ENST00000409739 M0QY20 66 aa21.03■□□□□ 0.96
TRAF3IP1-203ENST00000409739 RAB14P61106 215 aa21.03■□□□□ 0.96
TRAF3IP1-203ENST00000409739 ADIRFQ15847 76 aa21.03■□□□□ 0.96
TRAF3IP1-203ENST00000409739 TSKUQ8WUA8 353 aa21.03■□□□□ 0.96
TRAF3IP1-203ENST00000409739 FOXA3P55318 350 aaPredicted RBP21.02■□□□□ 0.96
TRAF3IP1-203ENST00000409739 NFE4Q86UQ8 179 aa21.02■□□□□ 0.96
TRAF3IP1-203ENST00000409739 C15orf54Q8N8G6 183 aa21.02■□□□□ 0.96
TRAF3IP1-203ENST00000409739 V9GYV3 84 aa21.02■□□□□ 0.96
TRAF3IP1-203ENST00000409739 H7C1H1 209 aa21.01■□□□□ 0.95
TRAF3IP1-203ENST00000409739 GFRA4Q9GZZ7 299 aa21.01■□□□□ 0.95
TRAF3IP1-203ENST00000409739 DNAH11Q96DT5 4516 aa20.99■□□□□ 0.95
TRAF3IP1-203ENST00000409739 HIGD1CA8MV81 97 aa20.99■□□□□ 0.95
TRAF3IP1-203ENST00000409739 IBA57-AS1B1ANH7 110 aa20.99■□□□□ 0.95
TRAF3IP1-203ENST00000409739 FAM231BA6NCW3 169 aa20.97■□□□□ 0.95
TRAF3IP1-203ENST00000409739 IFITM2Q01629 132 aa20.97■□□□□ 0.95
TRAF3IP1-203ENST00000409739 RASL11AQ6T310 242 aa20.97■□□□□ 0.95
TRAF3IP1-203ENST00000409739 DNAJC30Q96LL9 226 aa20.97■□□□□ 0.95
TRAF3IP1-203ENST00000409739 TRBV6-8A0A0A6YYG3 113 aa20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 CLLU1Q5K131 121 aa20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 DAZ4Q86SG3 579 aaKnown RBP20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 NIT1Q86X76 327 aa20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 BORCS7Q96B45 105 aa20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 DAZ3Q9NR90 486 aaKnown RBP20.96■□□□□ 0.95
TRAF3IP1-203ENST00000409739 SMIM15Q7Z3B0 74 aa20.94■□□□□ 0.94
TRAF3IP1-203ENST00000409739 A0A1B0GUT8 65 aa20.93■□□□□ 0.94
TRAF3IP1-203ENST00000409739 LAGE3Q14657 143 aa20.93■□□□□ 0.94
TRAF3IP1-203ENST00000409739 Q9HAA7 133 aa20.92■□□□□ 0.94
TRAF3IP1-203ENST00000409739 URGCP-MRPS24S4R325 110 aa20.92■□□□□ 0.94
TRAF3IP1-203ENST00000409739 TRAV26-2A0A0B4J265 109 aa20.91■□□□□ 0.94
TRAF3IP1-203ENST00000409739 NTM-AS1Q6ZSK4 140 aa20.91■□□□□ 0.94
TRAF3IP1-203ENST00000409739 GATD1Q8NB37 220 aa20.91■□□□□ 0.94
TRAF3IP1-203ENST00000409739 NIT2Q9NQR4 276 aa20.91■□□□□ 0.94
TRAF3IP1-203ENST00000409739 DYNC1H1Q14204 4646 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-203ENST00000409739 TMEM97Q5BJF2 176 aa20.9■□□□□ 0.94
TRAF3IP1-203ENST00000409739 NUP35Q8NFH5 326 aa20.9■□□□□ 0.94
TRAF3IP1-203ENST00000409739 CHCHD7Q9BUK0 85 aa20.89■□□□□ 0.93
TRAF3IP1-203ENST00000409739 NAT8BQ9UHF3 227 aa20.88■□□□□ 0.93
TRAF3IP1-203ENST00000409739 A0A087WX48 190 aa20.87■□□□□ 0.93
TRAF3IP1-203ENST00000409739 SPATA12Q7Z6I5 190 aa20.87■□□□□ 0.93
TRAF3IP1-203ENST00000409739 FRZBQ92765 325 aa20.86■□□□□ 0.93
TRAF3IP1-203ENST00000409739 SMIM27A0A1W2PRY6 76 aa20.85■□□□□ 0.93
TRAF3IP1-203ENST00000409739 CHCHD5Q9BSY4 110 aa20.85■□□□□ 0.93
TRAF3IP1-203ENST00000409739 TMEM191AQ9H0A3 160 aa20.85■□□□□ 0.93
TRAF3IP1-203ENST00000409739 TRBV25-1A0A075B6N4 114 aa20.84■□□□□ 0.93
TRAF3IP1-203ENST00000409739 KRTAP10-2P60368 255 aa20.84■□□□□ 0.93
TRAF3IP1-203ENST00000409739 KCNIP4Q6PIL6 250 aa20.84■□□□□ 0.93
TRAF3IP1-203ENST00000409739 RPL39LQ96EH5 51 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-203ENST00000409739 A0A087WTM6 91 aa20.83■□□□□ 0.93
TRAF3IP1-203ENST00000409739 TMEM262E9PQX1 116 aa20.83■□□□□ 0.93
TRAF3IP1-203ENST00000409739 RIGQ13278 110 aa20.83■□□□□ 0.93
TRAF3IP1-203ENST00000409739 IQCJQ1A5X6 159 aa20.83■□□□□ 0.93
TRAF3IP1-203ENST00000409739 KLK12Q9UKR0 248 aa20.83■□□□□ 0.93
TRAF3IP1-203ENST00000409739 TRAV8-3A0A0A6YYJ7 113 aa20.82■□□□□ 0.92
TRAF3IP1-203ENST00000409739 C16orf90A8MZG2 172 aa20.82■□□□□ 0.92
TRAF3IP1-203ENST00000409739 PSCAO43653 123 aa20.82■□□□□ 0.92
TRAF3IP1-203ENST00000409739 MPV17L2Q567V2 206 aa20.82■□□□□ 0.92
TRAF3IP1-203ENST00000409739 IGHV1-24A0A0C4DH33 117 aa20.81■□□□□ 0.92
TRAF3IP1-203ENST00000409739 EREGO14944 169 aa20.8■□□□□ 0.92
TRAF3IP1-203ENST00000409739 PKIAP61925 76 aa20.8■□□□□ 0.92
TRAF3IP1-203ENST00000409739 RNF185Q96GF1 192 aa20.8■□□□□ 0.92
TRAF3IP1-203ENST00000409739 ELOBQ15370 118 aa20.79■□□□□ 0.92
TRAF3IP1-203ENST00000409739 GAGE6Q13070 117 aa20.78■□□□□ 0.92
TRAF3IP1-203ENST00000409739 AMN1Q8IY45 258 aa20.78■□□□□ 0.92
TRAF3IP1-203ENST00000409739 DEFB104AQ8WTQ1 72 aa20.78■□□□□ 0.92
TRAF3IP1-203ENST00000409739 GAS8-AS1O95177 125 aa20.77■□□□□ 0.92
TRAF3IP1-203ENST00000409739 PNRC1Q12796 327 aaPredicted RBP20.77■□□□□ 0.92
TRAF3IP1-203ENST00000409739 ATRAIDQ6UW56 229 aa20.77■□□□□ 0.92
TRAF3IP1-203ENST00000409739 TM2D2Q9BX73 214 aa20.77■□□□□ 0.92
TRAF3IP1-203ENST00000409739 LRCOL1A6NCL2 159 aa20.76■□□□□ 0.91
TRAF3IP1-203ENST00000409739 RAB4AP20338 218 aa20.76■□□□□ 0.91
TRAF3IP1-203ENST00000409739 COTL1Q14019 142 aa20.76■□□□□ 0.91
TRAF3IP1-203ENST00000409739 Q8N976 141 aa20.76■□□□□ 0.91
TRAF3IP1-203ENST00000409739 UBE2WQ96B02 151 aa20.76■□□□□ 0.91
TRAF3IP1-203ENST00000409739 TMEM243Q9BU79 118 aa20.75■□□□□ 0.91
TRAF3IP1-203ENST00000409739 UQCC3Q6UW78 93 aa20.74■□□□□ 0.91
TRAF3IP1-203ENST00000409739 MRAP2Q96G30 205 aa20.74■□□□□ 0.91
TRAF3IP1-203ENST00000409739 TRBV6-5A0A0K0K1A5 114 aa20.73■□□□□ 0.91
TRAF3IP1-203ENST00000409739 SDHAF1A6NFY7 115 aa20.73■□□□□ 0.91
TRAF3IP1-203ENST00000409739 ANGP03950 147 aaKnown RBP20.73■□□□□ 0.91
TRAF3IP1-203ENST00000409739 RBX1P62877 108 aa20.73■□□□□ 0.91
TRAF3IP1-203ENST00000409739 PPP1R2P9O14990 202 aa20.72■□□□□ 0.91
TRAF3IP1-203ENST00000409739 FUSP35637 526 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRAF3IP1-203ENST00000409739 RMI2Q96E14 147 aa20.72■□□□□ 0.91
TRAF3IP1-203ENST00000409739 DNAH5Q8TE73 4624 aa20.72■□□□□ 0.91
TRAF3IP1-203ENST00000409739 RPS10P46783 165 aaKnown RBP20.71■□□□□ 0.91
TRAF3IP1-203ENST00000409739 AMTP48728 403 aa20.71■□□□□ 0.91
TRAF3IP1-203ENST00000409739 KIAA1109Q2LD37 5005 aa20.7■□□□□ 0.91
TRAF3IP1-203ENST00000409739 LRP1BQ9NZR2 4599 aa20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 A0A1B0GW15 77 aa20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 ADCYAP1P18509 176 aa20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 CAMPP49913 170 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms