RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SPRY2O43597 315 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 ZNF702PQ9H963 129 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 PFN2P35080 140 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 TIMM17AQ99595 171 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 IFITM1P13164 125 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 PPDPFLQ8WWR9 84 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 PRO1854Q9UHT4 67 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 WDR87Q6ZQQ6 2873 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 A0A096LPF7 62 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
PCDHA13-202ENST00000409494 CDK2AP2O75956 126 aa12.71□□□□□ -0.37
PCDHA13-202ENST00000409494 LINC01006Q8NI28 216 aa12.71□□□□□ -0.37
PCDHA13-202ENST00000409494 AMTNQ6UX39 209 aa12.71□□□□□ -0.38
PCDHA13-202ENST00000409494 CXCL5P42830 114 aa12.71□□□□□ -0.38
PCDHA13-202ENST00000409494 TRAV12-1A0A0B4J245 112 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 COX7A2LO14548 114 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 IGLV1-40P01703 118 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 MYO18BQ8IUG5 2567 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 CDSNQ15517 529 aa12.7□□□□□ -0.38
PCDHA13-202ENST00000409494 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 BRI3O95415 125 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 LINC00322Q6ZN03 302 aaPredicted RBP12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 HIVEP3Q5T1R4 2406 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 TAX1BP3O14907 124 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 MIFP14174 115 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 MLST8Q9BVC4 326 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
PCDHA13-202ENST00000409494 FGF6P10767 208 aa12.68□□□□□ -0.38
PCDHA13-202ENST00000409494 XCL1P47992 114 aa12.68□□□□□ -0.38
PCDHA13-202ENST00000409494 CRIP2P52943 208 aaPredicted RBP12.68□□□□□ -0.38
PCDHA13-202ENST00000409494 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
PCDHA13-202ENST00000409494 RPL39LQ96EH5 51 aaKnown RBP12.68□□□□□ -0.38
PCDHA13-202ENST00000409494 GAGE12HA6NDE8 117 aa12.67□□□□□ -0.38
PCDHA13-202ENST00000409494 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 Q6ZQT7 251 aa12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 RNASE8Q8TDE3 154 aaKnown RBP12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 HIGD1BQ9P298 99 aa12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 C11orf45Q8TAV5 145 aa12.66□□□□□ -0.38
PCDHA13-202ENST00000409494 COL4A2P08572 1712 aa12.65□□□□□ -0.38
PCDHA13-202ENST00000409494 NXPH4O95158 308 aa12.65□□□□□ -0.39
PCDHA13-202ENST00000409494 KIR2DL5BQ8NHK3 375 aa12.65□□□□□ -0.39
PCDHA13-202ENST00000409494 CAMK2N2Q96S95 79 aa12.65□□□□□ -0.39
PCDHA13-202ENST00000409494 WNK1Q9H4A3 2382 aa12.64□□□□□ -0.39
PCDHA13-202ENST00000409494 IGLL5B9A064 214 aa12.64□□□□□ -0.39
PCDHA13-202ENST00000409494 H7C423 109 aa12.64□□□□□ -0.39
PCDHA13-202ENST00000409494 TOMM6Q96B49 74 aa12.64□□□□□ -0.39
PCDHA13-202ENST00000409494 C14orf177Q52M58 125 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 MDFICQ9P1T7 246 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 IGLC6P0CF74 106 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 FXYD2P54710 66 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 TTTY13Q9BZ97 58 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 PLXNB1O43157 2135 aa12.63□□□□□ -0.39
PCDHA13-202ENST00000409494 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
PCDHA13-202ENST00000409494 Q9H8V8 135 aa12.62□□□□□ -0.39
PCDHA13-202ENST00000409494 Q9HAA7 133 aa12.62□□□□□ -0.39
PCDHA13-202ENST00000409494 NDUFA1O15239 70 aa12.62□□□□□ -0.39
PCDHA13-202ENST00000409494 H3BQ85 93 aa12.62□□□□□ -0.39
PCDHA13-202ENST00000409494 ODF1Q14990 250 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 HCFC1P51610 2035 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 NACAE9PAV3 2078 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 CRYBA4P53673 196 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 SOCS3O14543 225 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 CLPSL2Q6UWE3 100 aa12.61□□□□□ -0.39
PCDHA13-202ENST00000409494 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 VSIG2Q96IQ7 327 aa12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 PRRC2AP48634 2157 aaKnown RBP12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 CFC1BP0CG36 223 aa12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 CFC1P0CG37 223 aa12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 RPL32P62910 135 aaKnown RBP12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 KIAA1549Q9HCM3 1950 aa12.6□□□□□ -0.39
PCDHA13-202ENST00000409494 A0A0J9YXV3 536 aa12.59□□□□□ -0.39
PCDHA13-202ENST00000409494 UBE2BP63146 152 aa12.59□□□□□ -0.39
PCDHA13-202ENST00000409494 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
PCDHA13-202ENST00000409494 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
PCDHA13-202ENST00000409494 ZNF80P51504 273 aaPredicted RBP12.58□□□□□ -0.4
PCDHA13-202ENST00000409494 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
PCDHA13-202ENST00000409494 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.4
PCDHA13-202ENST00000409494 ANKRD11Q6UB99 2663 aaPredicted RBP12.58□□□□□ -0.4
PCDHA13-202ENST00000409494 IGHV3-30P01768 117 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 IGHV3-30-3P0DP02 117 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 IGHV3-30-5P0DP03 117 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 EDA2RQ9HAV5 297 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 GAGE2AQ6NT46 116 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 C16orf95Q9H693 158 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 DEFB1P60022 68 aa12.57□□□□□ -0.4
PCDHA13-202ENST00000409494 ZFAND2AQ8N6M9 145 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms