RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CNFNQ9BYD5 112 aa12.08□□□□□ -0.47
PDLIM2-206ENST00000409141 M0QY20 66 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 CT83Q5H943 113 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 SUMO4Q6EEV6 95 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 SPATA12Q7Z6I5 190 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 Q8N3U1 123 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 PGLYRP4Q96LB8 373 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
PDLIM2-206ENST00000409141 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
PDLIM2-206ENST00000409141 Q9HAA7 133 aa12.07□□□□□ -0.48
PDLIM2-206ENST00000409141 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
PDLIM2-206ENST00000409141 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 EREGO14944 169 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 DAZ4Q86SG3 579 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 NIT1Q86X76 327 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 C15orf54Q8N8G6 183 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 DAZ3Q9NR90 486 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-206ENST00000409141 C16orf90A8MZG2 172 aa12.05□□□□□ -0.48
PDLIM2-206ENST00000409141 PSCAO43653 123 aa12.05□□□□□ -0.48
PDLIM2-206ENST00000409141 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
PDLIM2-206ENST00000409141 RASL11AQ6T310 242 aa12.05□□□□□ -0.48
PDLIM2-206ENST00000409141 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
PDLIM2-206ENST00000409141 DNAH11Q96DT5 4516 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 A0A087WX48 190 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 RAB14P61106 215 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 RPL23P62829 140 aaKnown RBP12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 LAGE3Q14657 143 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 BORCS7Q96B45 105 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
PDLIM2-206ENST00000409141 TMEM262E9PQX1 116 aa12.03□□□□□ -0.48
PDLIM2-206ENST00000409141 ADIRFQ15847 76 aa12.03□□□□□ -0.48
PDLIM2-206ENST00000409141 TMEM97Q5BJF2 176 aa12.03□□□□□ -0.48
PDLIM2-206ENST00000409141 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
PDLIM2-206ENST00000409141 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
PDLIM2-206ENST00000409141 A0A087WTM6 91 aa12.02□□□□□ -0.48
PDLIM2-206ENST00000409141 KRTAP10-2P60368 255 aa12.02□□□□□ -0.48
PDLIM2-206ENST00000409141 NIT2Q9NQR4 276 aa12.02□□□□□ -0.48
PDLIM2-206ENST00000409141 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 FAM231BA6NCW3 169 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 HIGD1CA8MV81 97 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 V9GYV3 84 aa12.02□□□□□ -0.49
PDLIM2-206ENST00000409141 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
PDLIM2-206ENST00000409141 TM2D2Q9BX73 214 aa12.01□□□□□ -0.49
PDLIM2-206ENST00000409141 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
PDLIM2-206ENST00000409141 KIAA1109Q2LD37 5005 aa12.01□□□□□ -0.49
PDLIM2-206ENST00000409141 DYNC1H1Q14204 4646 aaKnown RBP12□□□□□ -0.49
PDLIM2-206ENST00000409141 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
PDLIM2-206ENST00000409141 A0A1B0GUT8 65 aa12□□□□□ -0.49
PDLIM2-206ENST00000409141 ELOBQ15370 118 aa12□□□□□ -0.49
PDLIM2-206ENST00000409141 GATD1Q8NB37 220 aa12□□□□□ -0.49
PDLIM2-206ENST00000409141 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
PDLIM2-206ENST00000409141 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
PDLIM2-206ENST00000409141 FRZBQ92765 325 aa11.98□□□□□ -0.49
PDLIM2-206ENST00000409141 PKIAP61925 76 aa11.97□□□□□ -0.49
PDLIM2-206ENST00000409141 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 LRCOL1A6NCL2 159 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 MPV17L2Q567V2 206 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 NUP35Q8NFH5 326 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 RMI2Q96E14 147 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 NAT8BQ9UHF3 227 aa11.96□□□□□ -0.49
PDLIM2-206ENST00000409141 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 GAGE6Q13070 117 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 RIGQ13278 110 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
PDLIM2-206ENST00000409141 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 Q0VG73 95 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 COTL1Q14019 142 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 CLLU1Q5K131 121 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 CDPF1Q6NVV7 123 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 Q8N976 141 aa11.94□□□□□ -0.5
PDLIM2-206ENST00000409141 HERC2O95714 4834 aa11.93□□□□□ -0.5
PDLIM2-206ENST00000409141 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
PDLIM2-206ENST00000409141 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
PDLIM2-206ENST00000409141 CRPP02741 224 aa11.92□□□□□ -0.5
PDLIM2-206ENST00000409141 RBX1P62877 108 aa11.92□□□□□ -0.5
PDLIM2-206ENST00000409141 RAB4AP20338 218 aa11.91□□□□□ -0.5
PDLIM2-206ENST00000409141 AMTP48728 403 aa11.91□□□□□ -0.5
PDLIM2-206ENST00000409141 IFITM2Q01629 132 aa11.91□□□□□ -0.5
PDLIM2-206ENST00000409141 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
PDLIM2-206ENST00000409141 AMN1Q8IY45 258 aa11.91□□□□□ -0.5
PDLIM2-206ENST00000409141 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
PDLIM2-206ENST00000409141 Q8N814 137 aa11.9□□□□□ -0.5
PDLIM2-206ENST00000409141 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
PDLIM2-206ENST00000409141 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
PDLIM2-206ENST00000409141 UBE2L6O14933 153 aa11.89□□□□□ -0.51
PDLIM2-206ENST00000409141 LECT2O14960 151 aa11.89□□□□□ -0.51
PDLIM2-206ENST00000409141 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms