RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
SPTLC1P3-201ENST00000403408 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
SPTLC1P3-201ENST00000403408 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 FAM240BA0A1B0GVZ2 78 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 RAB4BP61018 213 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 REG3AQ06141 175 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 MAJINQ3KP22 176 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
SPTLC1P3-201ENST00000403408 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 TRBV6-1A0A0K0K1D8 114 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 ZNF674Q2M3X9 581 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 ZFP82Q8N141 532 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 STPG4Q8N801 248 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 DERL1Q9BUN8 251 aa7.34□□□□□ -1.23
SPTLC1P3-201ENST00000403408 A0A096LNI7 61 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 PEX7O00628 323 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 DEFA3P59666 94 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 ZNF56Q15929 161 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 ZNF726P1Q15940 193 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
SPTLC1P3-201ENST00000403408 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 A0A1W2PRE2 83 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 ATP6V0CP27449 155 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 CYCSP99999 105 aaKnown RBP7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 FAM162BQ5T6X4 162 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 AP5S1Q9NUS5 200 aa7.32□□□□□ -1.24
SPTLC1P3-201ENST00000403408 NDUFS6O75380 124 aaKnown RBP7.31□□□□□ -1.24
SPTLC1P3-201ENST00000403408 UBE2G2P60604 165 aa7.31□□□□□ -1.24
SPTLC1P3-201ENST00000403408 PKIAP61925 76 aa7.31□□□□□ -1.24
SPTLC1P3-201ENST00000403408 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
SPTLC1P3-201ENST00000403408 TRBV25-1A0A075B6N4 114 aa7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 FAM74A7A6NL05 159 aa7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 CXorf1O96002 111 aa7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 P01737 135 aa7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
SPTLC1P3-201ENST00000403408 IFNA7P01567 189 aa7.29□□□□□ -1.24
SPTLC1P3-201ENST00000403408 IFITM3Q01628 133 aa7.29□□□□□ -1.24
SPTLC1P3-201ENST00000403408 PSMG3Q9BT73 122 aaPredicted RBP7.29□□□□□ -1.24
SPTLC1P3-201ENST00000403408 CCDC32Q9BV29 185 aa7.29□□□□□ -1.24
SPTLC1P3-201ENST00000403408 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 IGHV1-24A0A0C4DH33 117 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 A0A1B0GUV1 79 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 SNAI2O43623 268 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 SSTP61278 116 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 ZFP30Q9Y2G7 519 aa7.28□□□□□ -1.24
SPTLC1P3-201ENST00000403408 H7C1H1 209 aa7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 M0QY20 66 aa7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 LTAP01374 205 aa7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 MZT2BQ6NZ67 158 aa7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 AQP10Q96PS8 301 aa7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 ACTR3CQ9C0K3 210 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1P3-201ENST00000403408 F5H697 171 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 HIST1H2BAQ96A08 127 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 TNFSF18Q9UNG2 199 aa7.26□□□□□ -1.25
SPTLC1P3-201ENST00000403408 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 PET100P0DJ07 73 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 GZMBP10144 247 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SERF2P84101 59 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 Q6ZRP5 223 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 FMC1Q96HJ9 113 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 TMEM243Q9BU79 118 aa7.25□□□□□ -1.25
SPTLC1P3-201ENST00000403408 MBP02144 154 aa7.24□□□□□ -1.25
SPTLC1P3-201ENST00000403408 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SUMO4Q6EEV6 95 aa7.24□□□□□ -1.25
SPTLC1P3-201ENST00000403408 ENKURQ8TC29 256 aa7.24□□□□□ -1.25
SPTLC1P3-201ENST00000403408 IGKV3OR2-268A0A0C4DH90 116 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 A0A1W2PNN7 141 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SSNA1O43805 119 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 CXCL1P09341 107 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 Q5BKY6 102 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 MARVELD1Q9BSK0 173 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 MLST8Q9BVC4 326 aa7.23□□□□□ -1.25
SPTLC1P3-201ENST00000403408 CTXND1A0A1B0GTU2 59 aa7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 UBE2G1P62253 170 aa7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 FOXI1Q12951 378 aa7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 RPL7L1Q6DKI1 246 aaKnown RBP7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 CHCHD10Q8WYQ3 142 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
SPTLC1P3-201ENST00000403408 SULT1A2P50226 295 aa7.21□□□□□ -1.26
SPTLC1P3-201ENST00000403408 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
SPTLC1P3-201ENST00000403408 FAM231BA6NCW3 169 aa7.2□□□□□ -1.26
SPTLC1P3-201ENST00000403408 MGPP08493 103 aa7.2□□□□□ -1.26
SPTLC1P3-201ENST00000403408 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms