RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
VAMP1-203ENST00000400911 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
VAMP1-203ENST00000400911 RAB4BP61018 213 aa9.27□□□□□ -0.93
VAMP1-203ENST00000400911 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
VAMP1-203ENST00000400911 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.93
VAMP1-203ENST00000400911 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
VAMP1-203ENST00000400911 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
VAMP1-203ENST00000400911 PKIAP61925 76 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 RBX1P62877 108 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 CIRBPQ14011 172 aaKnown RBP9.26□□□□□ -0.93
VAMP1-203ENST00000400911 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 ZNF674Q2M3X9 581 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 SLC51BQ86UW2 128 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 HIST1H2BAQ96A08 127 aa9.26□□□□□ -0.93
VAMP1-203ENST00000400911 FAM74A7A6NL05 159 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 GAGE6Q13070 117 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 ZNF56Q15929 161 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 PRR27Q6MZM9 219 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.25□□□□□ -0.93
VAMP1-203ENST00000400911 CLRN3Q8NCR9 226 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 CYTL1Q9NRR1 136 aa9.25□□□□□ -0.93
VAMP1-203ENST00000400911 IGLV10-54A0A075B6I4 117 aa9.24□□□□□ -0.93
VAMP1-203ENST00000400911 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
VAMP1-203ENST00000400911 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
VAMP1-203ENST00000400911 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
VAMP1-203ENST00000400911 AKR1C8PQ5T2L2 129 aa9.24□□□□□ -0.93
VAMP1-203ENST00000400911 FMC1Q96HJ9 113 aa9.24□□□□□ -0.93
VAMP1-203ENST00000400911 NKX6-2Q9C056 277 aaPredicted RBP9.24□□□□□ -0.93
VAMP1-203ENST00000400911 A0A087WYN8 130 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 SLPIP03973 132 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 UBE2G1P62253 170 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 ODF1Q14990 250 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
VAMP1-203ENST00000400911 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 STOML3Q8TAV4 291 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 DERL1Q9BUN8 251 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 DPH3P1Q9H4G8 78 aa9.23□□□□□ -0.93
VAMP1-203ENST00000400911 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 CTXND1A0A1B0GTU2 59 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 F5H697 171 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 LTAP01374 205 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
VAMP1-203ENST00000400911 TRBV6-1A0A0K0K1D8 114 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 UMAD1C9J7I0 102 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 PHOX2AO14813 284 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 SSTP61278 116 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 REG3AQ06141 175 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 TMEM97Q5BJF2 176 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
VAMP1-203ENST00000400911 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
VAMP1-203ENST00000400911 RAB5CP51148 216 aa9.2□□□□□ -0.94
VAMP1-203ENST00000400911 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
VAMP1-203ENST00000400911 AP5S1Q9NUS5 200 aa9.2□□□□□ -0.94
VAMP1-203ENST00000400911 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.19□□□□□ -0.94
VAMP1-203ENST00000400911 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
VAMP1-203ENST00000400911 TEX46H3BTG2 121 aa9.18□□□□□ -0.94
VAMP1-203ENST00000400911 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
VAMP1-203ENST00000400911 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
VAMP1-203ENST00000400911 CST9LP1Q5W188 147 aa9.18□□□□□ -0.94
VAMP1-203ENST00000400911 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
VAMP1-203ENST00000400911 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
VAMP1-203ENST00000400911 TRAV8-4A0A0B4J246 113 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 SNAI2O43623 268 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 P01737 135 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 AKR1C3P42330 323 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 C20orf203Q8NBC4 194 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 FAM213BQ8TBF2 198 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 KIF25-AS1Q9Y6Z4 181 aa9.17□□□□□ -0.94
VAMP1-203ENST00000400911 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 SMIM17P0DL12 118 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 FHITP49789 147 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
VAMP1-203ENST00000400911 CXCL1P09341 107 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 OR5AL1P0C617 328 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 SULT1A2P50226 295 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 COX6A2Q02221 97 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 TEX261Q6UWH6 196 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 TCEAL7Q9BRU2 100 aa9.15□□□□□ -0.94
VAMP1-203ENST00000400911 M0QY20 66 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 RAB14P61106 215 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 BLOC1S1P78537 153 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
VAMP1-203ENST00000400911 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
VAMP1-203ENST00000400911 GZMBP10144 247 aa9.13□□□□□ -0.95
VAMP1-203ENST00000400911 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
VAMP1-203ENST00000400911 BAGE2Q86Y30 109 aa9.13□□□□□ -0.95
VAMP1-203ENST00000400911 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
VAMP1-203ENST00000400911 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms