RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
SCAF4-202ENST00000399804 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
SCAF4-202ENST00000399804 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
SCAF4-202ENST00000399804 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
SCAF4-202ENST00000399804 HELZ2Q9BYK8 2649 aaKnown RBP10.51□□□□□ -0.73
SCAF4-202ENST00000399804 FLNAP21333 2647 aaKnown RBP10.51□□□□□ -0.73
SCAF4-202ENST00000399804 A0A087WX48 190 aa10.5□□□□□ -0.73
SCAF4-202ENST00000399804 RNF152Q8N8N0 203 aa10.5□□□□□ -0.73
SCAF4-202ENST00000399804 RNASE13Q5GAN3 156 aaKnown RBP10.5□□□□□ -0.73
SCAF4-202ENST00000399804 COX6CP09669 75 aa10.5□□□□□ -0.73
SCAF4-202ENST00000399804 K7EMI3 77 aa10.49□□□□□ -0.73
SCAF4-202ENST00000399804 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
SCAF4-202ENST00000399804 CRXO43186 299 aaPredicted RBP10.49□□□□□ -0.73
SCAF4-202ENST00000399804 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
SCAF4-202ENST00000399804 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
SCAF4-202ENST00000399804 F8P00451 2351 aa10.49□□□□□ -0.73
SCAF4-202ENST00000399804 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 RNASE1P07998 156 aaKnown RBP10.48□□□□□ -0.73
SCAF4-202ENST00000399804 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
SCAF4-202ENST00000399804 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 BRI3O95415 125 aa10.48□□□□□ -0.73
SCAF4-202ENST00000399804 ZFHX4Q86UP3 3567 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 APOC4P55056 127 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 DAD1P61803 113 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 FLNCQ14315 2725 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 F5H768 121 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
SCAF4-202ENST00000399804 HILS1P60008 231 aa10.46□□□□□ -0.73
SCAF4-202ENST00000399804 RHOHQ15669 191 aa10.46□□□□□ -0.73
SCAF4-202ENST00000399804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.74
SCAF4-202ENST00000399804 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.74
SCAF4-202ENST00000399804 K7ERU9 68 aa10.46□□□□□ -0.74
SCAF4-202ENST00000399804 RASL10AQ92737 203 aa10.46□□□□□ -0.74
SCAF4-202ENST00000399804 CST9LQ9H4G1 147 aa10.46□□□□□ -0.74
SCAF4-202ENST00000399804 SNCGO76070 127 aa10.46□□□□□ -0.74
SCAF4-202ENST00000399804 RBX1P62877 108 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 TRBV25-1A0A075B6N4 114 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 KLLNB2CW77 178 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
SCAF4-202ENST00000399804 COPS9Q8WXC6 57 aa10.45□□□□□ -0.74
SCAF4-202ENST00000399804 A0A096LPF7 62 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 NPC2P61916 151 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 TMEM243Q9BU79 118 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 AGRNO00468 2067 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 ZZEF1O43149 2961 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 GAGE6Q13070 117 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 MORN3Q6PF18 240 aaPredicted RBP10.44□□□□□ -0.74
SCAF4-202ENST00000399804 ZNF479Q96JC4 524 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
SCAF4-202ENST00000399804 PRM2P04554 102 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 RPL13AP40429 203 aaKnown RBP10.43□□□□□ -0.74
SCAF4-202ENST00000399804 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
SCAF4-202ENST00000399804 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 MALP21145 153 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 NDUFA11Q86Y39 141 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
SCAF4-202ENST00000399804 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 P0DMU3 169 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 FAM231AP0DMU4 169 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 FAM231CP0DMU5 169 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 ODF1Q14990 250 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 U3KQK5 164 aa10.42□□□□□ -0.74
SCAF4-202ENST00000399804 CRLF1O75462 422 aa10.41□□□□□ -0.74
SCAF4-202ENST00000399804 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
SCAF4-202ENST00000399804 CNFNQ9BYD5 112 aa10.41□□□□□ -0.74
SCAF4-202ENST00000399804 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
SCAF4-202ENST00000399804 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
SCAF4-202ENST00000399804 SOCS3O14543 225 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 A0A0J9YXV3 536 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 A0A0J9YY99 117 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 DEFB135Q30KP9 77 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 CFAP47Q6ZTR5 3102 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 PAX4O43316 350 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 Q6ZTI0 123 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
SCAF4-202ENST00000399804 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
SCAF4-202ENST00000399804 J3QQQ9 107 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 DEFB4AO15263 64 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 BAALCQ8WXS3 180 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 SCRT2Q9NQ03 307 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 INSL3P51460 131 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 LINC00158P58513 81 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms