RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 MGPP08493 103 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
CTNS-203ENST00000399306 LELP1Q5T871 98 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
CTNS-203ENST00000399306 NEXN-AS1Q8NBZ9 246 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 IMMP2LQ96T52 175 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 Q9H8V8 135 aa12.13□□□□□ -0.47
CTNS-203ENST00000399306 TTC32Q5I0X7 151 aa12.12□□□□□ -0.47
CTNS-203ENST00000399306 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
CTNS-203ENST00000399306 Q6ZR54 194 aa12.12□□□□□ -0.47
CTNS-203ENST00000399306 ATP5L2Q7Z4Y8 100 aa12.12□□□□□ -0.47
CTNS-203ENST00000399306 Q9UF83 564 aa12.12□□□□□ -0.47
CTNS-203ENST00000399306 SIVA1O15304 175 aa12.11□□□□□ -0.47
CTNS-203ENST00000399306 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
CTNS-203ENST00000399306 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
CTNS-203ENST00000399306 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CTNS-203ENST00000399306 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
CTNS-203ENST00000399306 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
CTNS-203ENST00000399306 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
CTNS-203ENST00000399306 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
CTNS-203ENST00000399306 NBDYA0A0U1RRE5 68 aa12.09□□□□□ -0.47
CTNS-203ENST00000399306 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
CTNS-203ENST00000399306 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
CTNS-203ENST00000399306 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
CTNS-203ENST00000399306 HBBP68871 147 aa12.08□□□□□ -0.48
CTNS-203ENST00000399306 RHEBQ15382 184 aa12.08□□□□□ -0.48
CTNS-203ENST00000399306 MRAP2Q96G30 205 aa12.08□□□□□ -0.48
CTNS-203ENST00000399306 TRAV9-1A0A075B6T8 112 aa12.07□□□□□ -0.48
CTNS-203ENST00000399306 RAB4AP20338 218 aa12.07□□□□□ -0.48
CTNS-203ENST00000399306 NDUFA5Q16718 116 aa12.07□□□□□ -0.48
CTNS-203ENST00000399306 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 PPP1R17O96001 155 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
CTNS-203ENST00000399306 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 CHCHD7Q9BUK0 85 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
CTNS-203ENST00000399306 TRBV6-8A0A0A6YYG3 113 aa12.04□□□□□ -0.48
CTNS-203ENST00000399306 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
CTNS-203ENST00000399306 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
CTNS-203ENST00000399306 FRAS1Q86XX4 4008 aa12.04□□□□□ -0.48
CTNS-203ENST00000399306 C7orf77A4D0Y5 90 aa12.03□□□□□ -0.48
CTNS-203ENST00000399306 CAMPP49913 170 aa12.03□□□□□ -0.48
CTNS-203ENST00000399306 PKIAP61925 76 aa12.03□□□□□ -0.48
CTNS-203ENST00000399306 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
CTNS-203ENST00000399306 SVBPQ8N300 66 aa12.03□□□□□ -0.48
CTNS-203ENST00000399306 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
CTNS-203ENST00000399306 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
CTNS-203ENST00000399306 M0R2N4 97 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 SNAPINO95295 136 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 PPBPP02775 128 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 S100PP25815 95 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 IQCJQ1A5X6 159 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 DNAH17Q9UFH2 4485 aa12.01□□□□□ -0.49
CTNS-203ENST00000399306 NCR2O95944 276 aa12□□□□□ -0.49
CTNS-203ENST00000399306 APOC3P02656 99 aa12□□□□□ -0.49
CTNS-203ENST00000399306 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
CTNS-203ENST00000399306 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
CTNS-203ENST00000399306 LINC00336Q6ZUF6 198 aa12□□□□□ -0.49
CTNS-203ENST00000399306 C6orf223Q8N319 242 aa12□□□□□ -0.49
CTNS-203ENST00000399306 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
CTNS-203ENST00000399306 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
CTNS-203ENST00000399306 NIT1Q86X76 327 aa11.99□□□□□ -0.49
CTNS-203ENST00000399306 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
CTNS-203ENST00000399306 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
CTNS-203ENST00000399306 ST20Q9HBF5 79 aa11.99□□□□□ -0.49
CTNS-203ENST00000399306 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 PHOX2AO14813 284 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 COTL1Q14019 142 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 LAGE3Q14657 143 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 COX19Q49B96 90 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 NTM-AS1Q6ZSK4 140 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 NFE4Q86UQ8 179 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
CTNS-203ENST00000399306 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
CTNS-203ENST00000399306 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
CTNS-203ENST00000399306 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
CTNS-203ENST00000399306 NRACQ8N912 160 aa11.97□□□□□ -0.49
CTNS-203ENST00000399306 C20orf78Q9BR46 151 aa11.97□□□□□ -0.49
CTNS-203ENST00000399306 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
CTNS-203ENST00000399306 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 I3L3M4 83 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 CKS2P33552 79 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 ELOBQ15370 118 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.49
CTNS-203ENST00000399306 A0A087WX48 190 aa11.95□□□□□ -0.5
CTNS-203ENST00000399306 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
CTNS-203ENST00000399306 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms