RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 A0A0J9YXV3 536 aa10.4□□□□□ -0.74
APOB-202ENST00000399256 SNCGO76070 127 aa10.4□□□□□ -0.74
APOB-202ENST00000399256 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.74
APOB-202ENST00000399256 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
APOB-202ENST00000399256 IGKV3-20P01619 116 aa10.4□□□□□ -0.74
APOB-202ENST00000399256 NHLRC4P0CG21 123 aaPredicted RBP10.4□□□□□ -0.74
APOB-202ENST00000399256 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 LGALS9O00182 355 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 GAGE2BQ13066 116 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 GAGE5Q13069 117 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 GAGE6Q13070 117 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 LY6EQ16553 131 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 LINC01620Q4KN68 170 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 GAGE2EQ4V326 116 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.75
APOB-202ENST00000399256 BPESC1Q9GZL8 116 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.75
APOB-202ENST00000399256 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 RHODO00212 210 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 PF4V1P10720 104 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 MDFICQ9P1T7 246 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 P0DMU3 169 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
APOB-202ENST00000399256 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 TRBV7-9A0A0J9YWB2 115 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 M0QY20 66 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 IGHV1-69P01742 117 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 LMO4P61968 165 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 CELSR1Q9NYQ6 3014 aa10.38□□□□□ -0.75
APOB-202ENST00000399256 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 M0QXV9 152 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 TRIAP1O43715 76 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 PRB1P04280 392 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.37□□□□□ -0.75
APOB-202ENST00000399256 M0R2P5 195 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
APOB-202ENST00000399256 SPXQ9BT56 116 aa10.37□□□□□ -0.75
APOB-202ENST00000399256 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 PRSS2P07478 247 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 RHOHQ15669 191 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 NPC2P61916 151 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
APOB-202ENST00000399256 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
APOB-202ENST00000399256 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
APOB-202ENST00000399256 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
APOB-202ENST00000399256 TTC32Q5I0X7 151 aa10.35□□□□□ -0.75
APOB-202ENST00000399256 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
APOB-202ENST00000399256 TRAV8-3A0A0A6YYJ7 113 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 Q6ZSV7 163 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 USMG5Q96IX5 58 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 TRBV10-2A0A0K0K1G8 114 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 H3BMM0 161 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 ID1P41134 155 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
APOB-202ENST00000399256 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 UBE2WQ96B02 151 aa10.34□□□□□ -0.75
APOB-202ENST00000399256 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 IFITM1P13164 125 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 BLCAPP62952 87 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
APOB-202ENST00000399256 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 I3L3M4 83 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 ZNF843Q8N446 348 aa10.33□□□□□ -0.76
APOB-202ENST00000399256 SPTAN1Q13813 2472 aaKnown RBP10.32□□□□□ -0.76
APOB-202ENST00000399256 TRBV30A0A0K0K1B3 111 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 ADAMTSL4-AS1Q5T5F5 129 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 LITAFQ99732 161 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 A0A0J9YX75 114 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 CD28P10747 220 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
APOB-202ENST00000399256 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
APOB-202ENST00000399256 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 A8MZ25 164 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 C19orf84I3L1E1 186 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 CLEC2BQ92478 149 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 H3BUX3 64 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 H7C423 109 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE7O76087 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE12FP0CL80 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE12GP0CL81 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE12IP0CL82 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 GAGE4Q13068 117 aa10.31□□□□□ -0.76
APOB-202ENST00000399256 IGHG2P01859 326 aa10.3□□□□□ -0.76
APOB-202ENST00000399256 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
APOB-202ENST00000399256 IGHV4-38-2P0DP08 117 aa10.29□□□□□ -0.76
APOB-202ENST00000399256 NDUFA12Q9UI09 145 aa10.29□□□□□ -0.76
APOB-202ENST00000399256 ABCA2Q9BZC7 2435 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms