RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 GAGE5Q13069 117 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 ELOBQ15370 118 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 MRPL23Q16540 153 aaKnown RBP6.28□□□□□ -1.4
BRCC3-206ENST00000399042 GAGE13Q4V321 117 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 FAM104BQ5XKR9 115 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 TGP01266 2768 aa6.28□□□□□ -1.4
BRCC3-206ENST00000399042 A0A096LPF7 62 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 NCR2O95944 276 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 PPP1R17O96001 155 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 MT-ND6P03923 174 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 P0DMU3 169 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 FAM231AP0DMU4 169 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 FAM231CP0DMU5 169 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 RAB4AP20338 218 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 RPS10P46783 165 aaKnown RBP6.27□□□□□ -1.41
BRCC3-206ENST00000399042 MRPL51Q4U2R6 128 aaKnown RBP6.27□□□□□ -1.41
BRCC3-206ENST00000399042 OR10J3Q5JRS4 329 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 Q6ZSN1 163 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 C15orf53Q8NAA6 179 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 ZNRF2Q8NHG8 242 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
BRCC3-206ENST00000399042 MUC4Q99102 2169 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 TRBV24-1A0A075B6N3 115 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 TRBV10-1A0A0K0K1A3 114 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 D6R8Y8 96 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 SMKR1H3BMG3 65 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 PPBPP02775 128 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 UFSP1Q6NVU6 142 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 TMEM136Q6ZRR5 245 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 UBE2DNLQ8IWF7 75 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 ORMDL3Q8N138 153 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 ST20Q9HBF5 79 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 NIT2Q9NQR4 276 aa6.26□□□□□ -1.41
BRCC3-206ENST00000399042 TRBV7-3A0A075B6L6 115 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 M0QY20 66 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 LINC00315P59091 139 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 KIAA1644Q3SXP7 199 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
BRCC3-206ENST00000399042 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 PRELID3AQ96N28 172 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
BRCC3-206ENST00000399042 H3BNG1 76 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 RAB5AP20339 215 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 PMCHP20382 165 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 CCL18P55774 89 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 TCTAP57738 103 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 NEXN-AS1Q8NBZ9 246 aa6.24□□□□□ -1.41
BRCC3-206ENST00000399042 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 FCER1GP30273 86 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 CASC10Q5T4H9 136 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
BRCC3-206ENST00000399042 MAP1LC3AQ9H492 121 aa6.23□□□□□ -1.41
BRCC3-206ENST00000399042 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
BRCC3-206ENST00000399042 SDHAF1A6NFY7 115 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 VCYO14598 125 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 SUMO2P61956 95 aaKnown RBP6.22□□□□□ -1.41
BRCC3-206ENST00000399042 COTL1Q14019 142 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 DEFB104AQ8WTQ1 72 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 KIR2DL4Q99706 377 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 GTSF1LQ9H1H1 148 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 Q9UF83 564 aa6.22□□□□□ -1.41
BRCC3-206ENST00000399042 NACAE9PAV3 2078 aa6.21□□□□□ -1.41
BRCC3-206ENST00000399042 TRAV8-6A0A0B4J262 113 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 COLCA2A8K830 154 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
BRCC3-206ENST00000399042 TMEM262E9PQX1 116 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 I3L3M4 83 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 PHOX2AO14813 284 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 UBE2L6O14933 153 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 NPYP01303 97 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 TRGC2P03986 189 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 UBE2D3P61077 147 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 UBE2D2P62837 147 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 APLNQ9ULZ1 77 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 LAMTOR2Q9Y2Q5 125 aa6.21□□□□□ -1.42
BRCC3-206ENST00000399042 AMTP48728 403 aa6.2□□□□□ -1.42
BRCC3-206ENST00000399042 LYPD5Q6UWN5 251 aa6.2□□□□□ -1.42
BRCC3-206ENST00000399042 YPEL4Q96NS1 127 aa6.2□□□□□ -1.42
BRCC3-206ENST00000399042 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
BRCC3-206ENST00000399042 TRBV25-1A0A075B6N4 114 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms