RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 Q8TCH9 128 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 TCF20Q9UGU0 1960 aaKnown RBP9.49□□□□□ -0.89
SMU1-201ENST00000397149 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
SMU1-201ENST00000397149 REG3AQ06141 175 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 IGLC6P0CF74 106 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 RITA1Q96K30 269 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 LOC285556D6RIA3 1793 aa9.49□□□□□ -0.89
SMU1-201ENST00000397149 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
SMU1-201ENST00000397149 PRAC2D3DTV9 90 aa9.48□□□□□ -0.89
SMU1-201ENST00000397149 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
SMU1-201ENST00000397149 PCNX1Q96RV3 2341 aa9.48□□□□□ -0.89
SMU1-201ENST00000397149 CCKP06307 115 aa9.48□□□□□ -0.89
SMU1-201ENST00000397149 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 TRPM7Q96QT4 1865 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 MYLKQ15746 1914 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 MED13LQ71F56 2210 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 PARP14Q460N5 1801 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 PDE6GP18545 87 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 ARID2Q68CP9 1835 aa9.47□□□□□ -0.89
SMU1-201ENST00000397149 Q6ZS49 121 aa9.46□□□□□ -0.89
SMU1-201ENST00000397149 NBASA2RRP1 2371 aa9.46□□□□□ -0.89
SMU1-201ENST00000397149 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.89
SMU1-201ENST00000397149 TIMM17BO60830 172 aa9.46□□□□□ -0.89
SMU1-201ENST00000397149 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.89
SMU1-201ENST00000397149 ZNF503-AS2A6NEH8 195 aa9.46□□□□□ -0.9
SMU1-201ENST00000397149 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
SMU1-201ENST00000397149 C15orf65H3BRN8 121 aa9.46□□□□□ -0.9
SMU1-201ENST00000397149 SCN4AP35499 1836 aa9.46□□□□□ -0.9
SMU1-201ENST00000397149 PTPRQQ9UMZ3 2332 aa9.46□□□□□ -0.9
SMU1-201ENST00000397149 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 FREM1Q5H8C1 2179 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 LY6LH3BQJ8 138 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 LINC00643Q86TS7 51 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
SMU1-201ENST00000397149 GREB1Q4ZG55 1949 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 COL4A5P29400 1685 aa9.45□□□□□ -0.9
SMU1-201ENST00000397149 IGHV7-81A0A0B4J1V7 117 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 TCL1BO95988 128 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 HILS1P60008 231 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 TOMM6Q96B49 74 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 C1orf195Q5TG92 126 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 CTSZQ9UBR2 303 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 WNK3Q9BYP7 1800 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
SMU1-201ENST00000397149 TRBV6-1A0A0K0K1D8 114 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 CIRBP-AS1Q8TBR5 109 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 TRBV10-1A0A0K0K1A3 114 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SMU1-201ENST00000397149 H3BT86 120 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 RNASE8Q8TDE3 154 aaKnown RBP9.42□□□□□ -0.9
SMU1-201ENST00000397149 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 E9PLD3 99 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 MYCNOSP40205 109 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 C22orf34Q6ZV56 151 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 TP53TG3Q9ULZ0 132 aa9.42□□□□□ -0.9
SMU1-201ENST00000397149 ARHGAP21Q5T5U3 1957 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 Q6ZTI0 123 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 TET1Q8NFU7 2136 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 NUPR1O60356 82 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 MT-ATP8P03928 68 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 PMAIP1Q13794 54 aa9.41□□□□□ -0.9
SMU1-201ENST00000397149 A6NDX4 124 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 MIAQ16674 131 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 SORL1Q92673 2214 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.9
SMU1-201ENST00000397149 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
SMU1-201ENST00000397149 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
SMU1-201ENST00000397149 Q6Q795 121 aa9.39□□□□□ -0.91
SMU1-201ENST00000397149 C5orf56Q8N8D9 126 aa9.39□□□□□ -0.91
SMU1-201ENST00000397149 UQCRQO14949 82 aa9.39□□□□□ -0.91
SMU1-201ENST00000397149 FAM19A3Q7Z5A8 133 aa9.39□□□□□ -0.91
SMU1-201ENST00000397149 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
SMU1-201ENST00000397149 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
SMU1-201ENST00000397149 ESRGQ1W209 222 aa9.38□□□□□ -0.91
SMU1-201ENST00000397149 PRRC2AP48634 2157 aaKnown RBP9.38□□□□□ -0.91
SMU1-201ENST00000397149 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
SMU1-201ENST00000397149 BRCA1P38398 1863 aaKnown RBP9.38□□□□□ -0.91
SMU1-201ENST00000397149 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
SMU1-201ENST00000397149 K7EIM0 57 aa9.37□□□□□ -0.91
SMU1-201ENST00000397149 C6orf99Q4VX62 202 aa9.37□□□□□ -0.91
SMU1-201ENST00000397149 I3L2K1 104 aa9.37□□□□□ -0.91
SMU1-201ENST00000397149 MAP6D1Q9H9H5 199 aa9.37□□□□□ -0.91
SMU1-201ENST00000397149 FAM215AQ9Y5M1 114 aa9.37□□□□□ -0.91
SMU1-201ENST00000397149 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms