RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 Q1RN00 199 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 POM121L12Q8N7R1 296 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 KIF25-AS1Q9Y6Z4 181 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 IGHV4OR15-8A0A075B7B6 117 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 A0A087WW49 117 aa17.94■□□□□ 0.46
CSNK1E-203ENST00000396832 VCYO14598 125 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 ATXN8Q156A1 80 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 KLK9Q2XQG4 91 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 LINC01620Q4KN68 170 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 KLK9Q9UKQ9 250 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 ACACBO00763 2458 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 PF4V1P10720 104 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 LMO4P61968 165 aa17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 RPL32P62910 135 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-203ENST00000396832 IGHV3-64A0A075B6Q5 118 aa17.92■□□□□ 0.46
CSNK1E-203ENST00000396832 A0A0B4J2C4 111 aa17.92■□□□□ 0.46
CSNK1E-203ENST00000396832 ODF3Q96PU9 254 aa17.92■□□□□ 0.46
CSNK1E-203ENST00000396832 BEX4Q9NWD9 120 aaPredicted RBP17.92■□□□□ 0.46
CSNK1E-203ENST00000396832 TRAV8-4A0A0B4J246 113 aa17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 LY6DQ14210 128 aa17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 SUMO4Q6EEV6 95 aa17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 OPRPNQ99935 248 aaPredicted RBP17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 OVOL1O14753 267 aa17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 ZNF256Q9Y2P7 627 aaPredicted RBP17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 MOB4Q9Y3A3 225 aa17.91■□□□□ 0.46
CSNK1E-203ENST00000396832 SDHAF1A6NFY7 115 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 SOCS3O14543 225 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 TRAV12-3A0A0B4J271 114 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 TRBV7-9A0A0J9YWB2 115 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 Q6Q795 121 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 C15orf53Q8NAA6 179 aa17.9■□□□□ 0.46
CSNK1E-203ENST00000396832 LEPROTO15243 131 aa17.89■□□□□ 0.45
CSNK1E-203ENST00000396832 RHPN1-AS1Q9BWJ2 59 aa17.89■□□□□ 0.45
CSNK1E-203ENST00000396832 BLCAPP62952 87 aa17.88■□□□□ 0.45
CSNK1E-203ENST00000396832 TRAV12-2A0A075B6T6 113 aa17.88■□□□□ 0.45
CSNK1E-203ENST00000396832 TMEM223A0PJW6 202 aa17.88■□□□□ 0.45
CSNK1E-203ENST00000396832 RPL13AP40429 203 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-203ENST00000396832 NXPH4O95158 308 aa17.87■□□□□ 0.45
CSNK1E-203ENST00000396832 FAM159AQ6UWV7 190 aa17.87■□□□□ 0.45
CSNK1E-203ENST00000396832 FAM19A4Q96LR4 140 aa17.87■□□□□ 0.45
CSNK1E-203ENST00000396832 UTP20O75691 2785 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-203ENST00000396832 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.86■□□□□ 0.45
CSNK1E-203ENST00000396832 TRBV10-2A0A0K0K1G8 114 aa17.86■□□□□ 0.45
CSNK1E-203ENST00000396832 TMEM95Q3KNT9 176 aa17.86■□□□□ 0.45
CSNK1E-203ENST00000396832 CFAP46Q8IYW2 2715 aa17.86■□□□□ 0.45
CSNK1E-203ENST00000396832 FAM223BA6NKX1 122 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 IGHV4-38-2P0DP08 117 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 FAM223AQ8IWN6 122 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 SMIM20Q8N5G0 67 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 ZANQ9Y493 2812 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 H3BMM0 161 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 UBE2WQ96B02 151 aa17.85■□□□□ 0.45
CSNK1E-203ENST00000396832 TRBV27A0A0K0K1C4 114 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 TRIAP1O43715 76 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 H3BUX3 64 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 NDUFA4O00483 81 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 HERV-K104P63124 156 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 SHISA2Q6UWI4 295 aa17.84■□□□□ 0.45
CSNK1E-203ENST00000396832 CACNA1AO00555 2505 aa17.83■□□□□ 0.45
CSNK1E-203ENST00000396832 KLRB1Q12918 225 aa17.83■□□□□ 0.45
CSNK1E-203ENST00000396832 LINC01600Q96MT4 127 aa17.83■□□□□ 0.45
CSNK1E-203ENST00000396832 FAM110AQ9BQ89 295 aa17.83■□□□□ 0.44
CSNK1E-203ENST00000396832 TRBV30A0A0K0K1B3 111 aa17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 LGALS9O00182 355 aa17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 APRG1Q8IVJ8 170 aa17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 ZNF22P17026 224 aaPredicted RBP17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 C2orf82Q6UX34 121 aa17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 ZNF580Q9UK33 172 aa17.82■□□□□ 0.44
CSNK1E-203ENST00000396832 M0R2P5 195 aa17.81■□□□□ 0.44
CSNK1E-203ENST00000396832 ZNF56Q15929 161 aa17.81■□□□□ 0.44
CSNK1E-203ENST00000396832 C19orf84I3L1E1 186 aa17.81■□□□□ 0.44
CSNK1E-203ENST00000396832 C19orf54Q5BKX5 351 aa17.81■□□□□ 0.44
CSNK1E-203ENST00000396832 CENPEQ02224 2701 aa17.8■□□□□ 0.44
CSNK1E-203ENST00000396832 MDFICQ9P1T7 246 aa17.8■□□□□ 0.44
CSNK1E-203ENST00000396832 A0A0J9YXY3 114 aa17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 IGHV1-69P01742 117 aa17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 USP9YO00507 2555 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 A0A0J9YXV3 536 aa17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 ADARB2-AS1A8MUL3 147 aa17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 CFAP161Q6P656 301 aa17.79■□□□□ 0.44
CSNK1E-203ENST00000396832 FLNCQ14315 2725 aa17.78■□□□□ 0.44
CSNK1E-203ENST00000396832 TRBV6-5A0A0K0K1A5 114 aa17.78■□□□□ 0.44
CSNK1E-203ENST00000396832 H7C423 109 aa17.78■□□□□ 0.44
CSNK1E-203ENST00000396832 HTN1P15515 57 aa17.78■□□□□ 0.44
CSNK1E-203ENST00000396832 C10orf99Q6UWK7 81 aa17.78■□□□□ 0.44
CSNK1E-203ENST00000396832 PRSS2P07478 247 aa17.77■□□□□ 0.44
CSNK1E-203ENST00000396832 NACAE9PAV3 2078 aa17.76■□□□□ 0.43
CSNK1E-203ENST00000396832 IGHV4-61A0A0C4DH41 118 aa17.76■□□□□ 0.43
CSNK1E-203ENST00000396832 POLQO75417 2590 aa17.76■□□□□ 0.43
CSNK1E-203ENST00000396832 A0A0J9YX75 114 aa17.76■□□□□ 0.43
CSNK1E-203ENST00000396832 MEIG1Q5JSS6 88 aa17.76■□□□□ 0.43
CSNK1E-203ENST00000396832 DAZ1Q9NQZ3 744 aaKnown RBP17.75■□□□□ 0.43
CSNK1E-203ENST00000396832 NOTCH3Q9UM47 2321 aa17.75■□□□□ 0.43
CSNK1E-203ENST00000396832 NSUN5P1Q3KNT7 163 aa17.75■□□□□ 0.43
CSNK1E-203ENST00000396832 ICOSQ9Y6W8 199 aa17.75■□□□□ 0.43
CSNK1E-203ENST00000396832 IGHV3-73A0A0B4J1V6 119 aa17.74■□□□□ 0.43
CSNK1E-203ENST00000396832 SPXQ9BT56 116 aa17.74■□□□□ 0.43
CSNK1E-203ENST00000396832 DUX3Q96PT4 197 aa17.74■□□□□ 0.43
CSNK1E-203ENST00000396832 KLLNB2CW77 178 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 IGHV3-30-3P0DP02 117 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms