RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 WDR73Q6P4I2 378 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 UQCC3Q6UW78 93 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 GZMBP10144 247 aa10.92□□□□□ -0.66
CLTA-203ENST00000396603 ADIRFQ15847 76 aa10.92□□□□□ -0.66
CLTA-203ENST00000396603 LELP1Q5T871 98 aa10.92□□□□□ -0.66
CLTA-203ENST00000396603 FAM74A4Q5TZK3 123 aa10.92□□□□□ -0.66
CLTA-203ENST00000396603 IGHV3-73A0A0B4J1V6 119 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 LOC100131303A0A0U1RQF7 123 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 CTRLP40313 264 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
CLTA-203ENST00000396603 Q8N814 137 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 SLC25A29Q8N8R3 303 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 GFRA4Q9GZZ7 299 aa10.91□□□□□ -0.66
CLTA-203ENST00000396603 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
CLTA-203ENST00000396603 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.66
CLTA-203ENST00000396603 LYZL1Q6UWQ5 148 aa10.9□□□□□ -0.66
CLTA-203ENST00000396603 Q6ZSN1 163 aa10.9□□□□□ -0.66
CLTA-203ENST00000396603 TM2D2Q9BX73 214 aa10.9□□□□□ -0.66
CLTA-203ENST00000396603 A0A087WWL8 130 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 PNRC1Q12796 327 aaPredicted RBP10.89□□□□□ -0.67
CLTA-203ENST00000396603 UFSP1Q6NVU6 142 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 OR10G8Q8NGN5 311 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 TSKUQ8WUA8 353 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 SAMD10Q9BYL1 202 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 JPT2Q9H910 190 aa10.89□□□□□ -0.67
CLTA-203ENST00000396603 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
CLTA-203ENST00000396603 MUC21A0A0G2JKD1 596 aa10.88□□□□□ -0.67
CLTA-203ENST00000396603 MUC21A0A140T8X8 626 aa10.88□□□□□ -0.67
CLTA-203ENST00000396603 RAB4BP61018 213 aa10.88□□□□□ -0.67
CLTA-203ENST00000396603 SSTP61278 116 aa10.88□□□□□ -0.67
CLTA-203ENST00000396603 ZNF56Q15929 161 aa10.88□□□□□ -0.67
CLTA-203ENST00000396603 TRBV10-1A0A0K0K1A3 114 aa10.87□□□□□ -0.67
CLTA-203ENST00000396603 SMR3BP02814 79 aaPredicted RBP10.87□□□□□ -0.67
CLTA-203ENST00000396603 NTF3P20783 257 aa10.87□□□□□ -0.67
CLTA-203ENST00000396603 FOXA3P55318 350 aaPredicted RBP10.87□□□□□ -0.67
CLTA-203ENST00000396603 TWIST1Q15672 202 aa10.87□□□□□ -0.67
CLTA-203ENST00000396603 F5H697 171 aa10.86□□□□□ -0.67
CLTA-203ENST00000396603 PPP1R2P9O14990 202 aa10.86□□□□□ -0.67
CLTA-203ENST00000396603 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
CLTA-203ENST00000396603 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
CLTA-203ENST00000396603 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
CLTA-203ENST00000396603 TRAV8-3A0A0A6YYJ7 113 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 H7C1H1 209 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
CLTA-203ENST00000396603 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
CLTA-203ENST00000396603 DPH3P1Q9H4G8 78 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 Q9HAA7 133 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 COX11Q9Y6N1 276 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 V9GYV3 84 aa10.85□□□□□ -0.67
CLTA-203ENST00000396603 A0A1B0GUT8 65 aa10.84□□□□□ -0.67
CLTA-203ENST00000396603 HIGD1CA8MV81 97 aa10.84□□□□□ -0.67
CLTA-203ENST00000396603 Q6ZSA8 131 aa10.84□□□□□ -0.67
CLTA-203ENST00000396603 COMMD7Q86VX2 200 aa10.84□□□□□ -0.67
CLTA-203ENST00000396603 PGLYRP4Q96LB8 373 aa10.84□□□□□ -0.67
CLTA-203ENST00000396603 A0A087WWC5 75 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 LINC00862A6NCI5 91 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 MGPP08493 103 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 NAT8BQ9UHF3 227 aa10.83□□□□□ -0.68
CLTA-203ENST00000396603 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 F8W036 122 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 IGHV3-30P01768 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 IGHV3-33P01772 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 MT-ND4LP03901 98 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
CLTA-203ENST00000396603 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 IGHV3-30-5P0DP03 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 GAGE1Q13065 139 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 GAGE4Q13068 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 GAGE5Q13069 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 RIGQ13278 110 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
CLTA-203ENST00000396603 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
CLTA-203ENST00000396603 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
CLTA-203ENST00000396603 KIF25-AS1Q9Y6Z4 181 aa10.81□□□□□ -0.68
CLTA-203ENST00000396603 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
CLTA-203ENST00000396603 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
CLTA-203ENST00000396603 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
CLTA-203ENST00000396603 A0A1B0GW15 77 aa10.79□□□□□ -0.68
CLTA-203ENST00000396603 S100A8P05109 93 aa10.79□□□□□ -0.68
CLTA-203ENST00000396603 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
CLTA-203ENST00000396603 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
CLTA-203ENST00000396603 RMI2Q96E14 147 aa10.79□□□□□ -0.68
CLTA-203ENST00000396603 DNAJC30Q96LL9 226 aa10.79□□□□□ -0.68
CLTA-203ENST00000396603 HAMPP81172 84 aa10.78□□□□□ -0.68
CLTA-203ENST00000396603 TMEM97Q5BJF2 176 aa10.78□□□□□ -0.68
CLTA-203ENST00000396603 CHCHD7Q9BUK0 85 aa10.78□□□□□ -0.68
CLTA-203ENST00000396603 SUMO4Q6EEV6 95 aa10.77□□□□□ -0.69
CLTA-203ENST00000396603 RASL11AQ6T310 242 aa10.77□□□□□ -0.69
CLTA-203ENST00000396603 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
CLTA-203ENST00000396603 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
CLTA-203ENST00000396603 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms