RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MAP1LC3AQ9H492 121 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 RETNQ9HD89 108 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 TNFRSF6BO95407 300 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 IGHV3-53P01767 116 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
VAPB-202ENST00000395802 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
VAPB-202ENST00000395802 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 HSBP1O75506 76 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 LINC00614P0C842 121 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 AMTP48728 403 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 PYY3Q5JQD4 70 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 ZNF479Q96JC4 524 aa9.74□□□□□ -0.85
VAPB-202ENST00000395802 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 M0QY20 66 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 PMCHP20382 165 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 DEFA6Q01524 100 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
VAPB-202ENST00000395802 ATP5G1P05496 136 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 GATA1P15976 413 aaPredicted RBP9.72□□□□□ -0.85
VAPB-202ENST00000395802 SUMO2P61956 95 aaKnown RBP9.72□□□□□ -0.85
VAPB-202ENST00000395802 NRACQ8N912 160 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 ST20Q9HBF5 79 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
VAPB-202ENST00000395802 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 IFI27P40305 119 aaPredicted RBP9.72□□□□□ -0.85
VAPB-202ENST00000395802 C12orf57Q99622 126 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 PRADC1Q9BSG0 188 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 TNFRSF18Q9Y5U5 241 aa9.72□□□□□ -0.85
VAPB-202ENST00000395802 A0A0J9YWU9 116 aa9.71□□□□□ -0.85
VAPB-202ENST00000395802 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.85
VAPB-202ENST00000395802 RHOHQ15669 191 aa9.71□□□□□ -0.85
VAPB-202ENST00000395802 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 LOC389332A0A1B0GUA5 103 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 K7EMI3 77 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 K7EQD1 137 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
VAPB-202ENST00000395802 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 HHLA3Q9XRX5 114 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 TCAPO15273 167 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
VAPB-202ENST00000395802 FHL2Q14192 279 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 JOSD1Q15040 202 aaPredicted RBP9.7□□□□□ -0.86
VAPB-202ENST00000395802 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 FA2HQ7L5A8 372 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
VAPB-202ENST00000395802 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 CELA1Q9UNI1 258 aa9.7□□□□□ -0.86
VAPB-202ENST00000395802 VCYO14598 125 aa9.69□□□□□ -0.86
VAPB-202ENST00000395802 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
VAPB-202ENST00000395802 RPL39LQ96EH5 51 aaKnown RBP9.69□□□□□ -0.86
VAPB-202ENST00000395802 KIR2DL4Q99706 377 aa9.69□□□□□ -0.86
VAPB-202ENST00000395802 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 Q8N8P6 123 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 IGLV2-18A0A075B6J9 118 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 G0S2P27469 103 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 C12orf74Q32Q52 190 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
VAPB-202ENST00000395802 A0A096LNJ9 63 aa9.67□□□□□ -0.86
VAPB-202ENST00000395802 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
VAPB-202ENST00000395802 Q6ZSN1 163 aa9.67□□□□□ -0.86
VAPB-202ENST00000395802 TMEM70Q9BUB7 260 aa9.67□□□□□ -0.86
VAPB-202ENST00000395802 F5H768 121 aa9.66□□□□□ -0.86
VAPB-202ENST00000395802 I3L3M4 83 aa9.66□□□□□ -0.86
VAPB-202ENST00000395802 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
VAPB-202ENST00000395802 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
VAPB-202ENST00000395802 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
VAPB-202ENST00000395802 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
VAPB-202ENST00000395802 CRYBA4P53673 196 aa9.66□□□□□ -0.86
VAPB-202ENST00000395802 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
VAPB-202ENST00000395802 PAX4O43316 350 aa9.65□□□□□ -0.86
VAPB-202ENST00000395802 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
VAPB-202ENST00000395802 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 C3orf79P0CE67 100 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 FCER1GP30273 86 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 LAGE3Q14657 143 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 SH2D6Q7Z4S9 175 aa9.64□□□□□ -0.87
VAPB-202ENST00000395802 P0DMU3 169 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 HTN3P15516 51 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 KRTDAPP60985 99 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 S100A12P80511 92 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 LINC00173Q6ZV60 143 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 H3BNG1 76 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 HBDP02042 147 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 Q6ZTC4 211 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 Q8N976 141 aa9.63□□□□□ -0.87
VAPB-202ENST00000395802 HUWE1Q7Z6Z7 4374 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms