RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 BIN3Q9NQY0 253 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 TNXBP22105 4242 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 C19orf71A6NCJ1 209 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 AKR1C8PQ5T2L2 129 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 HSD17B11Q8NBQ5 300 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 F2Z2F3 143 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 TAGLN2P37802 199 aaKnown RBP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 UBE2G1P62253 170 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 NTM-AS1Q6ZSK4 140 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 DAZAP1Q96EP5 407 aaKnown RBP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 TMA7Q9Y2S6 64 aaKnown RBP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 HERC1Q15751 4861 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 AKR1C3P42330 323 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 Q8N3U1 123 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 A0A087WX48 190 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 CTRLP40313 264 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 RAB5CP51148 216 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 JPT2Q9H910 190 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 TRBV25-1A0A075B6N4 114 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 A0A0D9SG52 128 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 M0QY20 66 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 IFNA7P01567 189 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 EIF5AP63241 154 aaKnown RBP3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 CTAG1AP78358 180 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 Q9UF83 564 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-64A0A075B6Q5 118 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 F8WDY8 70 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 CRPP02741 224 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 GVQW2A0A096LPI5 108 aaPredicted RBP3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 MPV17L2Q567V2 206 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 PLA2G2DQ9UNK4 145 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 RBX1P62877 108 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 LINC01600Q96MT4 127 aa3.97□□□□□ -1.77
SMARCAD1-203ENST00000394961 HMGB3O15347 200 aaKnown RBP3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 CCL25O15444 150 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 PFDN1O60925 122 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 C20orf203Q8NBC4 194 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 UBE2WQ96B02 151 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 SGK494Q96LW2 274 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 OR2T35Q8NGX2 323 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 BCL2L11O43521 198 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 Q5BKY6 102 aa3.96□□□□□ -1.78
SMARCAD1-203ENST00000394961 TRGC1P0CF51 173 aa3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 CCL20P78556 96 aa3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 OR10AG1Q8NH19 301 aa3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 LINC00474Q9P2X8 69 aa3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 HNRNPA3P51991 378 aaKnown RBP3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 RASL11AQ6T310 242 aa3.95□□□□□ -1.78
SMARCAD1-203ENST00000394961 A0A087WWL8 130 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 XKRY2A2RUG3 117 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 PDE6DO43924 150 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 REG3AQ06141 175 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 NIT2Q9NQR4 276 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 hCG_2014768A0A024R1R8 64 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 RNF151Q2KHN1 245 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 CT83Q5H943 113 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 BAGE2Q86Y30 109 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 C9orf62Q8N4C0 152 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 TMEM243Q9BU79 118 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 DPH3P1Q9H4G8 78 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 M0R381 172 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 ZNF56Q15929 161 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 TEX261Q6UWH6 196 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 FAM231DQ6ZW35 169 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 C15orf56Q8N910 161 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 DERL1Q9BUN8 251 aa3.94□□□□□ -1.78
SMARCAD1-203ENST00000394961 GRIFINA4D1Z8 144 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 PAGE4O60829 102 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 EIF3GO75821 320 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 ANGP03950 147 aaKnown RBP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 SUMO4Q6EEV6 95 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 MRPL52Q86TS9 123 aaKnown RBP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 SCO2A0A1W2PP80 73 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 UBE2G2P60604 165 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 FER1L6-AS1Q8NA97 138 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 SMIM17P0DL12 118 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 PRR3P79522 188 aaKnown RBP3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 FAM74A4Q5TZK3 123 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 C15orf54Q8N8G6 183 aa3.93□□□□□ -1.78
SMARCAD1-203ENST00000394961 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms