RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 FAM231AP0DMU4 169 aa12.08□□□□□ -0.47
PDZD4-202ENST00000393758 FAM231CP0DMU5 169 aa12.08□□□□□ -0.47
PDZD4-202ENST00000393758 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.47
PDZD4-202ENST00000393758 DAND5Q8N907 189 aa12.08□□□□□ -0.48
PDZD4-202ENST00000393758 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
PDZD4-202ENST00000393758 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
PDZD4-202ENST00000393758 NAV2Q8IVL1 2488 aa12.08□□□□□ -0.48
PDZD4-202ENST00000393758 B5MCH6 92 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 M0R2P5 195 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 ATXN8Q156A1 80 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 RNF183Q96D59 192 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 IGHV1OR15-1A0A075B7D0 117 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 MEIG1Q5JSS6 88 aa12.07□□□□□ -0.48
PDZD4-202ENST00000393758 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
PDZD4-202ENST00000393758 UCNP55089 124 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 I3L3M4 83 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 ITLN2Q8WWU7 325 aaPredicted RBP12.06□□□□□ -0.48
PDZD4-202ENST00000393758 PRM2P04554 102 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 GNLYP22749 145 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 LINC01587Q99440 93 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 NDUFA12Q9UI09 145 aa12.06□□□□□ -0.48
PDZD4-202ENST00000393758 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
PDZD4-202ENST00000393758 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
PDZD4-202ENST00000393758 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-202ENST00000393758 GPHB5Q86YW7 130 aa12.05□□□□□ -0.48
PDZD4-202ENST00000393758 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-202ENST00000393758 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
PDZD4-202ENST00000393758 SPENQ96T58 3664 aaKnown RBP12.05□□□□□ -0.48
PDZD4-202ENST00000393758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-202ENST00000393758 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-202ENST00000393758 CRYGDP07320 174 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 DEFB131AP59861 70 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 DYNLRB2Q8TF09 96 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 ZFYVE26Q68DK2 2539 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 A8MZ25 164 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 PRO0461Q9UI25 63 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 U3KQE9 123 aa12.04□□□□□ -0.48
PDZD4-202ENST00000393758 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 UBE2D1P51668 147 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 C11orf44Q8N8P7 122 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 TSHBP01222 138 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
PDZD4-202ENST00000393758 IGHV3-53P01767 116 aa12.02□□□□□ -0.48
PDZD4-202ENST00000393758 PROK1P58294 105 aa12.02□□□□□ -0.48
PDZD4-202ENST00000393758 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
PDZD4-202ENST00000393758 LEPROTO15243 131 aa12.02□□□□□ -0.49
PDZD4-202ENST00000393758 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
PDZD4-202ENST00000393758 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.49
PDZD4-202ENST00000393758 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
PDZD4-202ENST00000393758 RHODO00212 210 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 IGHV4-59P01825 116 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 POLR2KP53803 58 aaKnown RBP12.01□□□□□ -0.49
PDZD4-202ENST00000393758 TRGV11A0A075B6L2 103 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 H3BMM0 161 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 DEFB136Q30KP8 78 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
PDZD4-202ENST00000393758 TRAV13-1A0A0B4J241 112 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
PDZD4-202ENST00000393758 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 CARD19Q96LW7 228 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 TOMM7Q9P0U1 55 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
PDZD4-202ENST00000393758 LRRK2Q5S007 2527 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 PRSS47A8MTI9 375 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 MUC4Q99102 2169 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 C19orf84I3L1E1 186 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 DCHS2Q6V1P9 2916 aa12□□□□□ -0.49
PDZD4-202ENST00000393758 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
PDZD4-202ENST00000393758 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 C3orf56Q8N813 242 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 NRGNQ92686 78 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 CDIP1Q9H305 208 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 UBE2E2Q96LR5 201 aa11.99□□□□□ -0.49
PDZD4-202ENST00000393758 IGHG2P01859 326 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 IGHV4-30-2A0A087WSY4 118 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 MSMBP08118 114 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 Q6ZSV7 163 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
PDZD4-202ENST00000393758 M0QY20 66 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 COX6B1P14854 86 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 RHOHQ15669 191 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 PIEZO1Q92508 2521 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms