RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TMEM160Q9NX00 188 aa14.35□□□□□ -0.11
CCDC50-202ENST00000392456 C4orf26Q17RF5 130 aa14.34□□□□□ -0.11
CCDC50-202ENST00000392456 POM121L12Q8N7R1 296 aa14.34□□□□□ -0.11
CCDC50-202ENST00000392456 NSD1Q96L73 2696 aaPredicted RBP14.34□□□□□ -0.11
CCDC50-202ENST00000392456 ORM1P02763 201 aa14.34□□□□□ -0.11
CCDC50-202ENST00000392456 FAM104BQ5XKR9 115 aa14.34□□□□□ -0.11
CCDC50-202ENST00000392456 TRBV7-1A0A0A6YYK4 115 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 GP9P14770 177 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 RPL13AP40429 203 aaKnown RBP14.33□□□□□ -0.12
CCDC50-202ENST00000392456 LINC01559Q495D7 138 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 Q71RC1 249 aaPredicted RBP14.33□□□□□ -0.12
CCDC50-202ENST00000392456 FAM223BA6NKX1 122 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 HRCT1Q6UXD1 115 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 FAM223AQ8IWN6 122 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 SHANK2-AS3Q9BTD1 123 aa14.33□□□□□ -0.12
CCDC50-202ENST00000392456 FAM236AA0A1B0GUQ0 79 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 FAM236BA0A1B0GV22 79 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 BAHCC1Q9P281 2608 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 DNAJC9-AS1A6NH13 148 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 H3BRN7 92 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 LY6G6DO95868 133 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 AMN1Q8IY45 258 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 C17orf77Q96MU5 243 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 ZFAND3Q9H8U3 227 aa14.32□□□□□ -0.12
CCDC50-202ENST00000392456 LINC01546A6NGU7 62 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 TCRAP04437 139 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 CRYGDP07320 174 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 PSMB8P28062 276 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC50-202ENST00000392456 MRPL51Q4U2R6 128 aaKnown RBP14.31□□□□□ -0.12
CCDC50-202ENST00000392456 MRPL35Q9NZE8 188 aaKnown RBP14.31□□□□□ -0.12
CCDC50-202ENST00000392456 LGALS1P09382 135 aaKnown RBP14.31□□□□□ -0.12
CCDC50-202ENST00000392456 PRB4P10163 310 aaPredicted RBP14.31□□□□□ -0.12
CCDC50-202ENST00000392456 NDUFA11Q86Y39 141 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 LINC01600Q96MT4 127 aa14.31□□□□□ -0.12
CCDC50-202ENST00000392456 LGALS9O00182 355 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 LEPP41159 167 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 CLPSL1A2RUU4 121 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 ZNF785A8K8V0 405 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 H3BUA1 57 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 Q5XG85 94 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 ASCL2Q99929 193 aa14.3□□□□□ -0.12
CCDC50-202ENST00000392456 IGHV3OR16-13A0A075B7E8 117 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 IGHV3-74A0A0B4J1X5 117 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 HIST2H2BDQ6DRA6 164 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 ZNF580Q9UK33 172 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 FN1P02751 2386 aaKnown RBP14.29□□□□□ -0.12
CCDC50-202ENST00000392456 TRGV11A0A075B6L2 103 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 MRPS12O15235 138 aaKnown RBP14.29□□□□□ -0.12
CCDC50-202ENST00000392456 Q86TA4 180 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 MYOZ3Q8TDC0 251 aa14.29□□□□□ -0.12
CCDC50-202ENST00000392456 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
CCDC50-202ENST00000392456 IGHV3-66A0A0C4DH42 116 aa14.28□□□□□ -0.12
CCDC50-202ENST00000392456 SRSF2Q01130 221 aaKnown RBP14.28□□□□□ -0.12
CCDC50-202ENST00000392456 CEMP1Q6PRD7 247 aaPredicted RBP14.28□□□□□ -0.12
CCDC50-202ENST00000392456 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
CCDC50-202ENST00000392456 TEX49A0A1B0GTD5 131 aa14.27□□□□□ -0.12
CCDC50-202ENST00000392456 ZNF56Q15929 161 aa14.27□□□□□ -0.12
CCDC50-202ENST00000392456 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.12
CCDC50-202ENST00000392456 Q9H3A6 140 aa14.27□□□□□ -0.12
CCDC50-202ENST00000392456 PMVKQ15126 192 aa14.27□□□□□ -0.13
CCDC50-202ENST00000392456 GAGE2AQ6NT46 116 aa14.27□□□□□ -0.13
CCDC50-202ENST00000392456 SMKR1H3BMG3 65 aa14.26□□□□□ -0.13
CCDC50-202ENST00000392456 Q8N2B8 174 aa14.26□□□□□ -0.13
CCDC50-202ENST00000392456 Q6ZSV7 163 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 TMEM86BQ8N661 226 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 IMUPQ9GZP8 106 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 TMEM14CQ9P0S9 112 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 OXTP01178 125 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 EXOC3-AS1Q8N2X6 119 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 DPH3Q96FX2 82 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 SPANXDQ9BXN6 97 aa14.25□□□□□ -0.13
CCDC50-202ENST00000392456 NIPBLQ6KC79 2804 aaeCLIP14.25□□□□□ -0.13
CCDC50-202ENST00000392456 IGLV2-11P01706 119 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 CRYGAP11844 174 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 CKS2P33552 79 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 LINC00477Q96M19 166 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 SMAD5-AS1Q9Y6J3 95 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 F8P00451 2351 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 OVOL1O14753 267 aa14.24□□□□□ -0.13
CCDC50-202ENST00000392456 FAM240AA0A1B0GVK7 77 aa14.23□□□□□ -0.13
CCDC50-202ENST00000392456 SEC61GP60059 68 aa14.23□□□□□ -0.13
CCDC50-202ENST00000392456 TRBV19A0A075B6N1 114 aa14.23□□□□□ -0.13
CCDC50-202ENST00000392456 BUB3O43684 328 aa14.23□□□□□ -0.13
CCDC50-202ENST00000392456 H3BMM0 161 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 PLNP26678 52 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 COX7CP15954 63 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 C18orf65Q6ZTR6 163 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 PRNTQ86SH4 94 aa14.22□□□□□ -0.13
CCDC50-202ENST00000392456 EDN2P20800 178 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 MALP21145 153 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 OTORQ9NRC9 128 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 PRO0628Q9UI54 55 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 CFC1BP0CG36 223 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 CFC1P0CG37 223 aa14.21□□□□□ -0.13
CCDC50-202ENST00000392456 INAFM1C9JVW0 142 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 IGFL4Q6B9Z1 124 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 SIGLEC15Q6ZMC9 328 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 GOLT1AQ6ZVE7 132 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms