RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 CRYBA4P53673 196 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 ZFP2Q6ZN57 461 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 F8P00451 2351 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 C15orf53Q8NAA6 179 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
LTN1-202ENST00000389194 C11orf86A6NJI1 115 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 B5MCH6 92 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGHV3-30P01768 117 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGHV3-33P01772 117 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGHV3-30-5P0DP03 117 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGLL5B9A064 214 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 CDSNQ15517 529 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 LINC01545Q5VT33 79 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 SPATA12Q7Z6I5 190 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 C1QTNF4Q9BXJ3 329 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 VPREB3Q9UKI3 123 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 PROK1P58294 105 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 CRLF1O75462 422 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 CITED2Q99967 270 aaPredicted RBP3.82□□□□□ -1.8
LTN1-202ENST00000389194 PRSS47A8MTI9 375 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 F8W1H4 67 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 LINC01559Q495D7 138 aa3.82□□□□□ -1.8
LTN1-202ENST00000389194 EPG5Q9HCE0 2579 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 C2orf70A6NJV1 201 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 P0C879 139 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 CFC1BP0CG36 223 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 CFC1P0CG37 223 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 NPBQ8NG41 125 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 LAMA1P25391 3075 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 LRP4O75096 1905 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 GYPEP15421 78 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 CRIP1P50238 77 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 IGKV2D-24A0A075B6R9 120 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 NBL1P41271 181 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 C16orf54Q6UWD8 224 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 Q6ZS46 218 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 RAI1Q7Z5J4 1906 aaPredicted RBP3.81□□□□□ -1.8
LTN1-202ENST00000389194 WI2-2373I1.2A0A1W2PRP0 233 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 A8MZ25 164 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 RHODO00212 210 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 TMEM61Q8N0U2 210 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 TMEM190Q8WZ59 177 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 TRAV4A0A0B4J268 109 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 ODF1Q14990 250 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 DEFB135Q30KP9 77 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 C20orf173Q96LM9 149 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 IGKV2D-26A0A0A0MRZ7 120 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 C20orf78Q9BR46 151 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 MGAQ8IWI9 3026 aa3.81□□□□□ -1.8
LTN1-202ENST00000389194 DAZAP2Q15038 168 aaPredicted RBP3.8□□□□□ -1.8
LTN1-202ENST00000389194 BAALC-AS2P0C853 105 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 FOXI2Q6ZQN5 318 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 C19orf71A6NCJ1 209 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 EDN2P20800 178 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 COL6A3P12111 3177 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
LTN1-202ENST00000389194 SOCS3O14543 225 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 PIFOQ8TCI5 191 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 CGB3P0DN86 165 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 CGB7P0DN87 165 aa3.8□□□□□ -1.8
LTN1-202ENST00000389194 MRPL52Q86TS9 123 aaKnown RBP3.8□□□□□ -1.8
LTN1-202ENST00000389194 ATP5G1P05496 136 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 C10orf105Q8TEF2 133 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 MBD6Q96DN6 1003 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 NCR3O14931 201 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 GATA3P23771 443 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 IFITM1P13164 125 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 MAPKAPK5-AS1Q8N8E1 139 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 FLNBO75369 2602 aaKnown RBP3.79□□□□□ -1.8
LTN1-202ENST00000389194 hADV29S1A0JD25 119 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 ELANEP08246 267 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 ANKRD29Q8N6D5 301 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 COL4A4P53420 1690 aaPredicted RBP3.79□□□□□ -1.8
LTN1-202ENST00000389194 Q6ZUT4 128 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 HERVK_113P63121 156 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 SIRPDQ9H106 197 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 WFDC10AQ9H1F0 79 aa3.79□□□□□ -1.8
LTN1-202ENST00000389194 IGHG4P01861 327 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 DEFB113Q30KQ7 82 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 C8orf31Q8N9H6 132 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 SMAD5-AS1Q9Y6J3 95 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 EIF4EBP1Q13541 118 aaPredicted RBP3.78□□□□□ -1.8
LTN1-202ENST00000389194 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 LMO4P61968 165 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
LTN1-202ENST00000389194 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 TRANK1O15050 2925 aa3.78□□□□□ -1.8
LTN1-202ENST00000389194 A0A1B0GXF2 115 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms