RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 Q6ZSV7 163 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 M0R2N4 97 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 CXCL5P42830 114 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 COX8AP10176 69 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
LRRK1-201ENST00000388948 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.34□□□□□ -0.59
LRRK1-201ENST00000388948 OBSL1O75147 1896 aa11.34□□□□□ -0.59
LRRK1-201ENST00000388948 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
LRRK1-201ENST00000388948 A0A087WZ39 114 aa11.34□□□□□ -0.59
LRRK1-201ENST00000388948 RS1O15537 224 aa11.34□□□□□ -0.59
LRRK1-201ENST00000388948 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
LRRK1-201ENST00000388948 PCNX3Q9H6A9 2034 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 LYRM9A8MSI8 78 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 SMIM9A6NGZ8 99 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 E7EUB6 86 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
LRRK1-201ENST00000388948 ODF3L1Q8IXM7 274 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 K7ERJ3 54 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 COL4A4P53420 1690 aaPredicted RBP11.32□□□□□ -0.6
LRRK1-201ENST00000388948 LOC105371267A0A1B0GV96 52 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 IGLC2P0DOY2 106 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 IGLC3P0DOY3 106 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
LRRK1-201ENST00000388948 Q6ZTI0 123 aa11.31□□□□□ -0.6
LRRK1-201ENST00000388948 DAND5Q8N907 189 aa11.31□□□□□ -0.6
LRRK1-201ENST00000388948 C7orf33Q8WU49 177 aa11.31□□□□□ -0.6
LRRK1-201ENST00000388948 POLR3KQ9Y2Y1 108 aaPredicted RBP11.31□□□□□ -0.6
LRRK1-201ENST00000388948 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
LRRK1-201ENST00000388948 DIRC1Q969H9 104 aa11.31□□□□□ -0.6
LRRK1-201ENST00000388948 UBE2V1Q13404 147 aa11.31□□□□□ -0.6
LRRK1-201ENST00000388948 H0Y9J4 135 aa11.3□□□□□ -0.6
LRRK1-201ENST00000388948 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
LRRK1-201ENST00000388948 CFC1BP0CG36 223 aa11.3□□□□□ -0.6
LRRK1-201ENST00000388948 CFC1P0CG37 223 aa11.3□□□□□ -0.6
LRRK1-201ENST00000388948 C9orf118A6NHY6 69 aa11.3□□□□□ -0.6
LRRK1-201ENST00000388948 NREPQ16612 68 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 ODF3BA8MYP8 253 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 MIFP14174 115 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 REG3AQ06141 175 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 IFITM1P13164 125 aa11.29□□□□□ -0.6
LRRK1-201ENST00000388948 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 H0YGX0 51 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
LRRK1-201ENST00000388948 ARHGAP32A7KAX9 2087 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 MYO9AB2RTY4 2548 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 A0A096LNI7 61 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
LRRK1-201ENST00000388948 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.6
LRRK1-201ENST00000388948 CRYBA4P53673 196 aa11.27□□□□□ -0.6
LRRK1-201ENST00000388948 LGALS9O00182 355 aa11.27□□□□□ -0.6
LRRK1-201ENST00000388948 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.6
LRRK1-201ENST00000388948 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.6
LRRK1-201ENST00000388948 IGF1P05019 195 aa11.27□□□□□ -0.61
LRRK1-201ENST00000388948 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 SMR3AQ99954 134 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 MED14OSP0DP75 135 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 H3BMG7 143 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
LRRK1-201ENST00000388948 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 UBE2D1P51668 147 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 DLEU1O43261 78 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 H3BQ85 93 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
LRRK1-201ENST00000388948 F8W1H4 67 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 P0DMU3 169 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 NFE4Q86UQ8 179 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 LRRK2Q5S007 2527 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 Q6ZSR3 168 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 A0A1B0GX51 115 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 C10orf99Q6UWK7 81 aa11.24□□□□□ -0.61
LRRK1-201ENST00000388948 SIVA1O15304 175 aa11.23□□□□□ -0.61
LRRK1-201ENST00000388948 MP68P56378 58 aa11.23□□□□□ -0.61
LRRK1-201ENST00000388948 IL15RAQ13261 267 aa11.23□□□□□ -0.61
LRRK1-201ENST00000388948 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
LRRK1-201ENST00000388948 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
LRRK1-201ENST00000388948 LECT2O14960 151 aa11.23□□□□□ -0.61
LRRK1-201ENST00000388948 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms