RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TRBV10-3A0A0K0K1G6 114 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 HLA-DRB4P13762 266 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 GNG10P50151 68 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 RPS28P62857 69 aaKnown RBP-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 SNX29P2Q8IUI4 249 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 C20orf197Q8N268 126 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 CENPHQ9H3R5 247 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 PRO0255Q9UI72 69 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 NOP16Q9Y3C1 178 aaKnown RBP-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 HLA-DRB4X5D2U9 266 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 BCL9LQ86UU0 1499 aa-0.89□□□□□ -2.55
RNU6-541P-201ENST00000384709 PKHD1P08F94 4074 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 ADGRB1O14514 1584 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 YPEL1O60688 119 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 G0S2P27469 103 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 TFAMQ00059 246 aaKnown RBP-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 SPCS2Q15005 226 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 TMEM128Q5BJH2 165 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 CDC26Q8NHZ8 85 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 ZNF236Q9UL36 1845 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 ZMYM4Q5VZL5 1548 aa-0.9□□□□□ -2.55
RNU6-541P-201ENST00000384709 TRAV12-3A0A0B4J271 114 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 M0R2P5 195 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 PIN1P1O15428 100 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 DPM2O94777 84 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 SAMD13Q5VXD3 122 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 WFDC6Q9BQY6 131 aa-0.91□□□□□ -2.56
RNU6-541P-201ENST00000384709 KMT2CQ8NEZ4 4911 aaKnown RBP-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 LRRC37A2A6NM11 1700 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 GOLGA4Q13439 2230 aaKnown RBP-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 A0A1B0GX51 115 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 J3QLW9 94 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 SCTP09683 121 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 SPRR1AP35321 89 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 OR8I2Q8N0Y5 310 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 DDA1Q9BW61 102 aa-0.92□□□□□ -2.56
RNU6-541P-201ENST00000384709 NF1P21359 2839 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 A0A1B0GV72 72 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 J3KT08 172 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 RBP4P02753 201 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 PAEPP09466 180 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 TMEM35BQ8NCS4 154 aa-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 MAGOHBQ96A72 148 aaKnown RBP-0.93□□□□□ -2.56
RNU6-541P-201ENST00000384709 KDM5AP29375 1690 aaKnown RBP-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 HERC1Q15751 4861 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 TRAV36DV7A0A075B6V5 113 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 BORCS7-ASMTA0A0B4J1R7 106 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 CLPSL1A2RUU4 121 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 SMIM24O75264 130 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 EDDM3BP56851 147 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 SPAG11BQ08648 103 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 BANF2Q9H503 90 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 LRP6O75581 1613 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 ERCC6Q03468 1493 aa-0.94□□□□□ -2.56
RNU6-541P-201ENST00000384709 IBTKQ9P2D0 1353 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 ZNF609O15014 1411 aa-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 MT-ND4LP03901 98 aa-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 TMEM244Q5VVB8 128 aa-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 CALML5Q9NZT1 146 aa-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 LSM2Q9Y333 95 aaKnown RBP-0.95□□□□□ -2.56
RNU6-541P-201ENST00000384709 SVEP1Q4LDE5 3571 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 PAPPAQ13219 1627 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 PXDNQ92626 1479 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 UBE2D1P51668 147 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 CLLU1Q5K131 121 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 LINC01545Q5VT33 79 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 PPP1R2P3Q6NXS1 205 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 Q8IZM0 81 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 NDUFA12Q9UI09 145 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 MYH7P12883 1935 aa-0.96□□□□□ -2.56
RNU6-541P-201ENST00000384709 TRAV1-2A0A0B4J238 106 aa-0.97□□□□□ -2.56
RNU6-541P-201ENST00000384709 TNFSF15O95150 251 aa-0.97□□□□□ -2.56
RNU6-541P-201ENST00000384709 SKA2Q8WVK7 121 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-541P-201ENST00000384709 SYNJ1O43426 1573 aa-0.97□□□□□ -2.56
RNU6-541P-201ENST00000384709 PSME4Q14997 1843 aa-0.98□□□□□ -2.57
RNU6-541P-201ENST00000384709 TGP01266 2768 aa-0.98□□□□□ -2.57
RNU6-541P-201ENST00000384709 TRAV22A0A0B4J277 110 aa-0.98□□□□□ -2.57
RNU6-541P-201ENST00000384709 FABP1P07148 127 aa-0.98□□□□□ -2.57
RNU6-541P-201ENST00000384709 FAT1Q14517 4588 aa-0.98□□□□□ -2.57
RNU6-541P-201ENST00000384709 TRBV20-1A0A075B6N2 111 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 S100GP29377 79 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 VSTM2AQ8TAG5 236 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 HIGD1AQ9Y241 93 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 SPCS1Q9Y6A9 102 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 C10orf71Q711Q0 1435 aa-0.99□□□□□ -2.57
RNU6-541P-201ENST00000384709 MORN2Q502X0 79 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 C9orf116Q5BN46 136 aaPredicted RBP-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 SPANXN1Q5VSR9 72 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 TCTE3Q8IZS6 198 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 GINS2Q9Y248 185 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 V9GYQ6 96 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 DAPK1P53355 1430 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 KIF21AQ7Z4S6 1674 aa-1□□□□□ -2.57
RNU6-541P-201ENST00000384709 NBEAP1P0C6P0 100 aa-1.01□□□□□ -2.57
RNU6-541P-201ENST00000384709 BAGE3Q86Y29 109 aa-1.01□□□□□ -2.57
RNU6-541P-201ENST00000384709 C10orf82Q8WW14 230 aa-1.01□□□□□ -2.57
RNU6-541P-201ENST00000384709 SPANXCQ9NY87 97 aa-1.01□□□□□ -2.57
RNU6-541P-201ENST00000384709 HSPB11Q9Y547 144 aa-1.01□□□□□ -2.57
RNU6-541P-201ENST00000384709 I3L2K1 104 aa-1.02□□□□□ -2.57
RNU6-541P-201ENST00000384709 BTAF1O14981 1849 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms