RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 FAM222AQ5U5X8 452 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 IGLV10-54A0A075B6I4 117 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 TINCRA0A1B0GVN0 87 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 H3BT86 120 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 LTBP2Q14767 1821 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 CADP27708 2225 aa5.44□□□□□ -1.54
CCDC171-201ENST00000380701 NUPR2A6NF83 97 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 P0C879 139 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 REG3AQ06141 175 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 HIGD2BQ4VC39 106 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
CCDC171-201ENST00000380701 RITA1Q96K30 269 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 LY6LH3BQJ8 138 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 ZFAND2AQ8N6M9 145 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 ZFHX2Q9C0A1 2572 aaPredicted RBP5.43□□□□□ -1.54
CCDC171-201ENST00000380701 HELZP42694 1942 aaKnown RBP5.43□□□□□ -1.54
CCDC171-201ENST00000380701 DEFB105AQ8NG35 78 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 SS18L2Q9UHA2 77 aa5.43□□□□□ -1.54
CCDC171-201ENST00000380701 NAA38Q9BRA0 125 aaKnown RBP5.42□□□□□ -1.54
CCDC171-201ENST00000380701 TRAV26-1A0A087WT03 109 aa5.42□□□□□ -1.54
CCDC171-201ENST00000380701 RNASE13Q5GAN3 156 aaKnown RBP5.42□□□□□ -1.54
CCDC171-201ENST00000380701 UNQ9165/PRO28630Q6UXU0 137 aa5.42□□□□□ -1.54
CCDC171-201ENST00000380701 ANKHD1Q8IWZ3 2542 aaKnown RBP5.42□□□□□ -1.54
CCDC171-201ENST00000380701 MSMPQ1L6U9 139 aa5.42□□□□□ -1.54
CCDC171-201ENST00000380701 CRYGBP07316 175 aa5.42□□□□□ -1.54
CCDC171-201ENST00000380701 KIAA2026Q5HYC2 2103 aa5.42□□□□□ -1.54
CCDC171-201ENST00000380701 A0A0B4J2C4 111 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 C19orf71A6NCJ1 209 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 PRAC2D3DTV9 90 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 PHF3Q92576 2039 aaKnown RBP5.41□□□□□ -1.54
CCDC171-201ENST00000380701 IBA57-AS1B1ANH7 110 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 RS1O15537 224 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 TRBV12-3P01733 135 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 RBM3P98179 157 aaKnown RBP5.41□□□□□ -1.54
CCDC171-201ENST00000380701 LINC01006Q8NI28 216 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 BAALCQ8WXS3 180 aa5.41□□□□□ -1.54
CCDC171-201ENST00000380701 YLPM1P49750 1951 aaKnown RBP5.41□□□□□ -1.54
CCDC171-201ENST00000380701 BRI3O95415 125 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 ZNF702PQ9H963 129 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 PSMB8P28062 276 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 NTN5Q8WTR8 489 aaPredicted RBP5.4□□□□□ -1.54
CCDC171-201ENST00000380701 ZGRF1Q86YA3 2104 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 SEC61GP60059 68 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 MAJINQ3KP22 176 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
CCDC171-201ENST00000380701 F8WDY8 70 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 Q8N6K4 173 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 NOTCH2Q04721 2471 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 K7EP13 123 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 LELP1Q5T871 98 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 MPDZO75970 2070 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 ATOX1O00244 68 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 ETDBQ3ZM63 59 aa5.4□□□□□ -1.55
CCDC171-201ENST00000380701 CHCHD10Q8WYQ3 142 aaPredicted RBP5.4□□□□□ -1.55
CCDC171-201ENST00000380701 Q8N976 141 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 Q6ZTI0 123 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 MIR7-3HGQ8N6C7 128 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 PYGO1Q9Y3Y4 419 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 IGKV1D-37A0A075B6S9 117 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 TRBV6-5A0A0K0K1A5 114 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 IGLC6P0CF74 106 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 TRBV6-8A0A0A6YYG3 113 aa5.39□□□□□ -1.55
CCDC171-201ENST00000380701 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
CCDC171-201ENST00000380701 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
CCDC171-201ENST00000380701 PIEZO1Q92508 2521 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 NHLRC4P0CG21 123 aaPredicted RBP5.38□□□□□ -1.55
CCDC171-201ENST00000380701 ESM1Q9NQ30 184 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 NOTCH3Q9UM47 2321 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 IGLV1-40P01703 118 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 C16orf95Q9H693 158 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 MSRB1Q9NZV6 116 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 PROP1O75360 226 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 TMEM131Q92545 1883 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 HIST2H2BDQ6DRA6 164 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
CCDC171-201ENST00000380701 TP53BP1Q12888 1972 aaPredicted RBP5.38□□□□□ -1.55
CCDC171-201ENST00000380701 C10orf142B7Z368 130 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 GTSF1Q8WW33 167 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 CUL9Q8IWT3 2517 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 CRIP2P52943 208 aaPredicted RBP5.37□□□□□ -1.55
CCDC171-201ENST00000380701 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 TRBV10-2A0A0K0K1G8 114 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 UBE2D1P51668 147 aa5.37□□□□□ -1.55
CCDC171-201ENST00000380701 FAM110AQ9BQ89 295 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms