RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 ELANEP08246 267 aa9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 ASIPP42127 132 aa9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.91
PRPF40B-202ENST00000380281 LMO4P61968 165 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 C5orf56Q8N8D9 126 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
PRPF40B-202ENST00000380281 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 RHPN1-AS1Q9BWJ2 59 aa9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
PRPF40B-202ENST00000380281 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 A0A0J9YY99 117 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 PRM2P04554 102 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 NBL1P41271 181 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 EBI3Q14213 229 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 COX6B1P14854 86 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 GNLYP22749 145 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 BAALCQ8WXS3 180 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 KLK9Q9UKQ9 250 aa9.37□□□□□ -0.91
PRPF40B-202ENST00000380281 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 DOPEY1Q5JWR5 2465 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 ZNF56Q15929 161 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 Q1RN00 199 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 FBXL19-AS1Q494R0 122 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
PRPF40B-202ENST00000380281 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 OOSP1A8MZH6 123 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
PRPF40B-202ENST00000380281 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 A4D1N5 150 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 COX8CQ7Z4L0 72 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 LINC01587Q99440 93 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 Q6Q795 121 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 DUX3Q96PT4 197 aa9.34□□□□□ -0.91
PRPF40B-202ENST00000380281 PSMG3-AS1Q96PY0 264 aa9.33□□□□□ -0.92
PRPF40B-202ENST00000380281 C9orf139Q6ZV77 190 aa9.33□□□□□ -0.92
PRPF40B-202ENST00000380281 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-202ENST00000380281 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 TOMM6Q96B49 74 aa9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 KNCNA6PVL3 124 aa9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
PRPF40B-202ENST00000380281 IGHV1-69DA0A0B4J2H0 117 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 H3BMM0 161 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 IGHV1-69P01742 117 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 IGHV3-33P01772 117 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 UBE2WQ96B02 151 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 NPC2P61916 151 aa9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 CEMP1Q6PRD7 247 aaPredicted RBP9.31□□□□□ -0.92
PRPF40B-202ENST00000380281 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 HERVK_113P61574 105 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 IGHV4-30-2A0A087WSY4 118 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 SDHAF1A6NFY7 115 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 AVPP01185 164 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 CRYGDP07320 174 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 LGALS9O00182 355 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
PRPF40B-202ENST00000380281 TRGV11A0A075B6L2 103 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 C2orf82Q6UX34 121 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 HIVEP2P31629 2446 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 P0DMU3 169 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 FAM231AP0DMU4 169 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 FAM231CP0DMU5 169 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 KHDC1LQ5JSQ8 128 aa9.29□□□□□ -0.92
PRPF40B-202ENST00000380281 ZNF580Q9UK33 172 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms