RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ZNF479Q96JC4 524 aa17.5■□□□□ 0.39
ECHDC3-201ENST00000379215 SPATA25Q9BR10 227 aa17.5■□□□□ 0.39
ECHDC3-201ENST00000379215 SMIM2Q9BVW6 85 aa17.5■□□□□ 0.39
ECHDC3-201ENST00000379215 SPART-AS1P0CW21 52 aa17.5■□□□□ 0.39
ECHDC3-201ENST00000379215 K7EMI3 77 aa17.49■□□□□ 0.39
ECHDC3-201ENST00000379215 URB1-AS1Q96HZ7 61 aa17.49■□□□□ 0.39
ECHDC3-201ENST00000379215 NUPR1O60356 82 aa17.48■□□□□ 0.39
ECHDC3-201ENST00000379215 DEFB130BP0DP73 79 aa17.48■□□□□ 0.39
ECHDC3-201ENST00000379215 DEFB130AP0DP74 79 aa17.48■□□□□ 0.39
ECHDC3-201ENST00000379215 DNAJC30Q96LL9 226 aa17.48■□□□□ 0.39
ECHDC3-201ENST00000379215 C11orf68Q9H3H3 251 aaKnown RBP17.48■□□□□ 0.39
ECHDC3-201ENST00000379215 LINC01546A6NGU7 62 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 AMTP48728 403 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 NOTCH1P46531 2555 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 TRBV10-1A0A0K0K1A3 114 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 SBSPONQ8IVN8 264 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 HIST1H2BLQ99880 126 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 RETNQ9HD89 108 aa17.47■□□□□ 0.39
ECHDC3-201ENST00000379215 IGLV2-18A0A075B6J9 118 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 TRGV4A0A0C4DH28 118 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 VCYO14598 125 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 DEFB4AO15263 64 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 FABP4P15090 132 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 DAD1P61803 113 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 TM2D3Q9BRN9 247 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 TMEM70Q9BUB7 260 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 TNFRSF18Q9Y5U5 241 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 NBEAL1Q6ZS30 2694 aa17.45■□□□□ 0.38
ECHDC3-201ENST00000379215 TRBV6-4A0A1B0GX49 114 aa17.44■□□□□ 0.38
ECHDC3-201ENST00000379215 SDHAF1A6NFY7 115 aa17.44■□□□□ 0.38
ECHDC3-201ENST00000379215 K7EQD1 137 aa17.44■□□□□ 0.38
ECHDC3-201ENST00000379215 IFITM10A6NMD0 228 aa17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 TCAPO15273 167 aa17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 POLR2KP53803 58 aaKnown RBP17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 TRBV27A0A0K0K1C4 114 aa17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 Q6ZSN1 163 aa17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 KIR2DL4Q99706 377 aa17.43■□□□□ 0.38
ECHDC3-201ENST00000379215 ORMDL2Q53FV1 153 aa17.42■□□□□ 0.38
ECHDC3-201ENST00000379215 NACAE9PAV3 2078 aa17.41■□□□□ 0.38
ECHDC3-201ENST00000379215 IGHV1-24A0A0C4DH33 117 aa17.41■□□□□ 0.38
ECHDC3-201ENST00000379215 LAGE3Q14657 143 aa17.41■□□□□ 0.38
ECHDC3-201ENST00000379215 RHOHQ15669 191 aa17.41■□□□□ 0.38
ECHDC3-201ENST00000379215 MRAPQ8TCY5 172 aa17.41■□□□□ 0.38
ECHDC3-201ENST00000379215 FHL2Q14192 279 aa17.4■□□□□ 0.38
ECHDC3-201ENST00000379215 FAM19A2Q8N3H0 131 aa17.4■□□□□ 0.38
ECHDC3-201ENST00000379215 NEXN-AS1Q8NBZ9 246 aa17.4■□□□□ 0.38
ECHDC3-201ENST00000379215 ZMAT4Q9H898 229 aa17.4■□□□□ 0.38
ECHDC3-201ENST00000379215 G0S2P27469 103 aa17.39■□□□□ 0.38
ECHDC3-201ENST00000379215 RPL36AP83881 106 aaKnown RBP17.39■□□□□ 0.38
ECHDC3-201ENST00000379215 SLC25A29Q8N8R3 303 aa17.39■□□□□ 0.38
ECHDC3-201ENST00000379215 RPL36ALQ969Q0 106 aaKnown RBP17.39■□□□□ 0.38
ECHDC3-201ENST00000379215 PRADC1Q9BSG0 188 aa17.39■□□□□ 0.38
ECHDC3-201ENST00000379215 I3L3M4 83 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 HBDP02042 147 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 ATP5G1P05496 136 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 AKR1D1P51857 326 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 CELA1Q9UNI1 258 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 NBEAL2Q6ZNJ1 2754 aa17.39■□□□□ 0.37
ECHDC3-201ENST00000379215 P0DMU3 169 aa17.38■□□□□ 0.37
ECHDC3-201ENST00000379215 FAM231AP0DMU4 169 aa17.38■□□□□ 0.37
ECHDC3-201ENST00000379215 FAM231CP0DMU5 169 aa17.38■□□□□ 0.37
ECHDC3-201ENST00000379215 TRBV7-3A0A075B6L6 115 aa17.37■□□□□ 0.37
ECHDC3-201ENST00000379215 FCER1GP30273 86 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 OR10D4PQ8NGN7 298 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 HHLA3Q9XRX5 114 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 LEPROTL1O95214 131 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 PMCHL1Q16048 86 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 PRO0255Q9UI72 69 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 HSPB8Q9UJY1 196 aa17.36■□□□□ 0.37
ECHDC3-201ENST00000379215 LINC01549A6NIU2 74 aa17.35■□□□□ 0.37
ECHDC3-201ENST00000379215 NUDT3O95989 172 aa17.34■□□□□ 0.37
ECHDC3-201ENST00000379215 B9D2Q9BPU9 175 aa17.34■□□□□ 0.37
ECHDC3-201ENST00000379215 DAZ4Q86SG3 579 aaKnown RBP17.33■□□□□ 0.37
ECHDC3-201ENST00000379215 ZNRF2Q8NHG8 242 aa17.33■□□□□ 0.37
ECHDC3-201ENST00000379215 DAZ3Q9NR90 486 aaKnown RBP17.33■□□□□ 0.37
ECHDC3-201ENST00000379215 A0A0J9YWU9 116 aa17.32■□□□□ 0.36
ECHDC3-201ENST00000379215 NEGR1Q7Z3B1 354 aa17.32■□□□□ 0.36
ECHDC3-201ENST00000379215 CRYBA4P53673 196 aa17.32■□□□□ 0.36
ECHDC3-201ENST00000379215 A0A096LNJ9 63 aa17.31■□□□□ 0.36
ECHDC3-201ENST00000379215 BTF3P20290 206 aaKnown RBP17.3■□□□□ 0.36
ECHDC3-201ENST00000379215 UBE2D3P61077 147 aa17.3■□□□□ 0.36
ECHDC3-201ENST00000379215 UBE2D2P62837 147 aa17.3■□□□□ 0.36
ECHDC3-201ENST00000379215 C12orf74Q32Q52 190 aa17.3■□□□□ 0.36
ECHDC3-201ENST00000379215 GAGE12JA6NER3 117 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 TSHBP01222 138 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 GAGE1Q13065 139 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 GAGE4Q13068 117 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 GAGE5Q13069 117 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 COTL1Q14019 142 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 GAGE13Q4V321 117 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 Q9UF83 564 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 DNHD1Q96M86 4753 aa17.29■□□□□ 0.36
ECHDC3-201ENST00000379215 PAX4O43316 350 aa17.28■□□□□ 0.36
ECHDC3-201ENST00000379215 C11orf45Q8TAV5 145 aa17.28■□□□□ 0.36
ECHDC3-201ENST00000379215 F5H768 121 aa17.27■□□□□ 0.36
ECHDC3-201ENST00000379215 CYSLTR1Q9Y271 337 aa17.27■□□□□ 0.36
ECHDC3-201ENST00000379215 ATP5LO75964 103 aa17.26■□□□□ 0.35
ECHDC3-201ENST00000379215 TOMM6Q96B49 74 aa17.26■□□□□ 0.35
ECHDC3-201ENST00000379215 MAP1LC3CQ9BXW4 147 aa17.26■□□□□ 0.35
ECHDC3-201ENST00000379215 LINC00694P0DN24 101 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms