RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TRAV26-1A0A087WT03 109 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 TRBV7-9A0A0J9YWB2 115 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 A8MWV9 139 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 ELANEP08246 267 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 GEMIN7Q9H840 131 aaKnown RBP13.34□□□□□ -0.27
GNE-201ENST00000377902 A0A0J9YXV3 536 aa13.33□□□□□ -0.27
GNE-201ENST00000377902 SPINK13Q1W4C9 94 aa13.33□□□□□ -0.27
GNE-201ENST00000377902 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
GNE-201ENST00000377902 TMEM223A0PJW6 202 aa13.32□□□□□ -0.28
GNE-201ENST00000377902 A6NDX4 124 aa13.32□□□□□ -0.28
GNE-201ENST00000377902 IGLV1-40P01703 118 aa13.32□□□□□ -0.28
GNE-201ENST00000377902 C9orf85Q96MD7 179 aa13.32□□□□□ -0.28
GNE-201ENST00000377902 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
GNE-201ENST00000377902 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 C9JAW5 83 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 ID1P41134 155 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 LYRM7Q5U5X0 104 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 SBSPONQ8IVN8 264 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
GNE-201ENST00000377902 ZNF22P17026 224 aaPredicted RBP13.31□□□□□ -0.28
GNE-201ENST00000377902 IGHV3-33P01772 117 aa13.3□□□□□ -0.28
GNE-201ENST00000377902 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
GNE-201ENST00000377902 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
GNE-201ENST00000377902 PRM2P04554 102 aa13.3□□□□□ -0.28
GNE-201ENST00000377902 HTN1P15515 57 aa13.3□□□□□ -0.28
GNE-201ENST00000377902 RNASE13Q5GAN3 156 aaKnown RBP13.3□□□□□ -0.28
GNE-201ENST00000377902 H3BUA1 57 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 RHODO00212 210 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 LEPROTO15243 131 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 SLC25A20O43772 301 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 PROK1P58294 105 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 SPXQ9BT56 116 aa13.29□□□□□ -0.28
GNE-201ENST00000377902 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
GNE-201ENST00000377902 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 AVPP01185 164 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 NSUN5P1Q3KNT7 163 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 Q9UF83 564 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
GNE-201ENST00000377902 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.28
GNE-201ENST00000377902 BRI3O95415 125 aa13.27□□□□□ -0.28
GNE-201ENST00000377902 ERG28Q9UKR5 140 aa13.27□□□□□ -0.28
GNE-201ENST00000377902 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.29
GNE-201ENST00000377902 A0A0J9YX75 114 aa13.27□□□□□ -0.29
GNE-201ENST00000377902 CFHR3Q02985 330 aa13.27□□□□□ -0.29
GNE-201ENST00000377902 Q1RN00 199 aa13.27□□□□□ -0.29
GNE-201ENST00000377902 VCX2Q9H322 139 aa13.27□□□□□ -0.29
GNE-201ENST00000377902 UTP20O75691 2785 aaKnown RBP13.26□□□□□ -0.29
GNE-201ENST00000377902 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
GNE-201ENST00000377902 A8MZ25 164 aa13.26□□□□□ -0.29
GNE-201ENST00000377902 GATA3P23771 443 aa13.26□□□□□ -0.29
GNE-201ENST00000377902 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 ZANQ9Y493 2812 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
GNE-201ENST00000377902 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 A0A0J9YXY3 114 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 I3L3M4 83 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 K7EMT4 169 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 NPC2P61916 151 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 RHOHQ15669 191 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 Q6ZSV7 163 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 RNF183Q96D59 192 aa13.25□□□□□ -0.29
GNE-201ENST00000377902 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
GNE-201ENST00000377902 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
GNE-201ENST00000377902 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
GNE-201ENST00000377902 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
GNE-201ENST00000377902 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
GNE-201ENST00000377902 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
GNE-201ENST00000377902 PRSS2P07478 247 aa13.23□□□□□ -0.29
GNE-201ENST00000377902 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
GNE-201ENST00000377902 UCNP55089 124 aa13.23□□□□□ -0.29
GNE-201ENST00000377902 SYNJ2BPP57105 145 aa13.23□□□□□ -0.29
GNE-201ENST00000377902 ADAMTSL4-AS1Q5T5F5 129 aa13.23□□□□□ -0.29
GNE-201ENST00000377902 M0R2P5 195 aa13.22□□□□□ -0.29
GNE-201ENST00000377902 PSMB8P28062 276 aa13.22□□□□□ -0.29
GNE-201ENST00000377902 SNRPD3P62318 126 aaKnown RBP13.22□□□□□ -0.29
GNE-201ENST00000377902 GNLYP22749 145 aa13.22□□□□□ -0.29
GNE-201ENST00000377902 C10orf105Q8TEF2 133 aa13.22□□□□□ -0.29
GNE-201ENST00000377902 A0A0B4J2C4 111 aa13.21□□□□□ -0.29
GNE-201ENST00000377902 K7EQG2 157 aa13.21□□□□□ -0.29
GNE-201ENST00000377902 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
GNE-201ENST00000377902 CD28P10747 220 aa13.21□□□□□ -0.29
GNE-201ENST00000377902 TEX49A0A1B0GTD5 131 aa13.21□□□□□ -0.3
GNE-201ENST00000377902 TRIAP1O43715 76 aa13.21□□□□□ -0.3
GNE-201ENST00000377902 LITAFQ99732 161 aa13.21□□□□□ -0.3
GNE-201ENST00000377902 CRLF1O75462 422 aa13.2□□□□□ -0.3
GNE-201ENST00000377902 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
GNE-201ENST00000377902 CCL19Q99731 98 aa13.19□□□□□ -0.3
GNE-201ENST00000377902 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
GNE-201ENST00000377902 MSMBP08118 114 aa13.18□□□□□ -0.3
GNE-201ENST00000377902 Q6ZSN1 163 aa13.18□□□□□ -0.3
GNE-201ENST00000377902 ATP5J2P56134 94 aa13.18□□□□□ -0.3
GNE-201ENST00000377902 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
GNE-201ENST00000377902 FLNCQ14315 2725 aa13.17□□□□□ -0.3
GNE-201ENST00000377902 TRAV4A0A0B4J268 109 aa13.17□□□□□ -0.3
GNE-201ENST00000377902 ANAPC13Q9BS18 74 aa13.17□□□□□ -0.3
GNE-201ENST00000377902 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.16□□□□□ -0.3
GNE-201ENST00000377902 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
GNE-201ENST00000377902 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms