RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 APRG1Q8IVJ8 170 aa16.4■□□□□ 0.22
SYNDIG1-201ENST00000376862 CLEC2BQ92478 149 aa16.4■□□□□ 0.22
SYNDIG1-201ENST00000376862 RPL11P62913 178 aaKnown RBP16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 MED13LQ71F56 2210 aa16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 A0A0J9YX75 114 aa16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 PRSS2P07478 247 aa16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 MRPL23Q16540 153 aaKnown RBP16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 LITAFQ99732 161 aa16.39■□□□□ 0.21
SYNDIG1-201ENST00000376862 LINC00527Q9UJ94 153 aa16.38■□□□□ 0.21
SYNDIG1-201ENST00000376862 SPANXA1Q9NS26 97 aa16.38■□□□□ 0.21
SYNDIG1-201ENST00000376862 TNFRSF18Q9Y5U5 241 aa16.38■□□□□ 0.21
SYNDIG1-201ENST00000376862 ZFP36P26651 326 aaKnown RBP16.37■□□□□ 0.21
SYNDIG1-201ENST00000376862 ASH1LQ9NR48 2969 aaKnown RBP16.37■□□□□ 0.21
SYNDIG1-201ENST00000376862 PTPRQQ9UMZ3 2332 aa16.37■□□□□ 0.21
SYNDIG1-201ENST00000376862 H3BT86 120 aa16.37■□□□□ 0.21
SYNDIG1-201ENST00000376862 TRBV12-3P01733 135 aa16.37■□□□□ 0.21
SYNDIG1-201ENST00000376862 TRBV6-5A0A0K0K1A5 114 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 IGHV3-30-3P0DP02 117 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 NPC2P61916 151 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 NSUN5P1Q3KNT7 163 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 ADAMTSL4-AS1Q5T5F5 129 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 LINC01587Q99440 93 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 SPXQ9BT56 116 aa16.36■□□□□ 0.21
SYNDIG1-201ENST00000376862 PRRC2AP48634 2157 aaKnown RBP16.35■□□□□ 0.21
SYNDIG1-201ENST00000376862 GRNP28799 593 aaKnown RBP16.35■□□□□ 0.21
SYNDIG1-201ENST00000376862 SPTA1P02549 2419 aa16.34■□□□□ 0.21
SYNDIG1-201ENST00000376862 ZFHX3Q15911 3703 aa16.34■□□□□ 0.21
SYNDIG1-201ENST00000376862 IGLV4-3A0A075B6K6 122 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 TRAV8-3A0A0A6YYJ7 113 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 TRBV7-7A0A0K0K1E9 115 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 FAM240AA0A1B0GVK7 77 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 RHOHQ15669 191 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 C20orf203Q8NBC4 194 aa16.33■□□□□ 0.2
SYNDIG1-201ENST00000376862 M0QY20 66 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 COX6CP09669 75 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 DEFB121Q5J5C9 76 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 SIRPDQ9H106 197 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 TMEM95Q3KNT9 176 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 TIMM21Q9BVV7 248 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 VPREB3Q9UKI3 123 aa16.32■□□□□ 0.2
SYNDIG1-201ENST00000376862 TRAV12-3A0A0B4J271 114 aa16.31■□□□□ 0.2
SYNDIG1-201ENST00000376862 LST1O00453 97 aa16.31■□□□□ 0.2
SYNDIG1-201ENST00000376862 KLLNB2CW77 178 aa16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 PPDPFQ9H3Y8 114 aa16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 ANKHD1Q8IWZ3 2542 aaKnown RBP16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 TRGV11A0A075B6L2 103 aa16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 I3L3M4 83 aa16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 TMEM126AQ9H061 195 aa16.3■□□□□ 0.2
SYNDIG1-201ENST00000376862 SAA4P35542 130 aa16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 HRNRQ86YZ3 2850 aaPredicted RBP16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 K7ENP7 123 aa16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 TMEM219Q86XT9 240 aa16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 NBASA2RRP1 2371 aa16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 IGF2RP11717 2491 aa16.29■□□□□ 0.2
SYNDIG1-201ENST00000376862 TRAV41A0A0B4J266 112 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 FAM236AA0A1B0GUQ0 79 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 FAM236BA0A1B0GV22 79 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 C5orf56Q8N8D9 126 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 SPANXDQ9BXN6 97 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 SPANXCQ9NY87 97 aa16.28■□□□□ 0.2
SYNDIG1-201ENST00000376862 A8MZ25 164 aa16.27■□□□□ 0.2
SYNDIG1-201ENST00000376862 NDUFA4O00483 81 aa16.27■□□□□ 0.2
SYNDIG1-201ENST00000376862 TMEM101Q96IK0 257 aa16.27■□□□□ 0.2
SYNDIG1-201ENST00000376862 FAM223BA6NKX1 122 aa16.26■□□□□ 0.19
SYNDIG1-201ENST00000376862 MIAQ16674 131 aa16.26■□□□□ 0.19
SYNDIG1-201ENST00000376862 FAM223AQ8IWN6 122 aa16.26■□□□□ 0.19
SYNDIG1-201ENST00000376862 NDUFA12Q9UI09 145 aa16.26■□□□□ 0.19
SYNDIG1-201ENST00000376862 CEMP1Q6PRD7 247 aaPredicted RBP16.26■□□□□ 0.19
SYNDIG1-201ENST00000376862 IGHV3-11P01762 117 aa16.25■□□□□ 0.19
SYNDIG1-201ENST00000376862 RNASE13Q5GAN3 156 aaKnown RBP16.25■□□□□ 0.19
SYNDIG1-201ENST00000376862 TMEM61Q8N0U2 210 aa16.24■□□□□ 0.19
SYNDIG1-201ENST00000376862 IGHV3-16A0A0C4DH30 117 aa16.24■□□□□ 0.19
SYNDIG1-201ENST00000376862 CD28P10747 220 aa16.24■□□□□ 0.19
SYNDIG1-201ENST00000376862 FAM104AQ969W3 186 aa16.24■□□□□ 0.19
SYNDIG1-201ENST00000376862 C9orf85Q96MD7 179 aa16.24■□□□□ 0.19
SYNDIG1-201ENST00000376862 RHPN1-AS1Q9BWJ2 59 aa16.23■□□□□ 0.19
SYNDIG1-201ENST00000376862 IGHV1-58A0A0C4DH39 117 aa16.23■□□□□ 0.19
SYNDIG1-201ENST00000376862 C19orf54Q5BKX5 351 aa16.23■□□□□ 0.19
SYNDIG1-201ENST00000376862 EDN2P20800 178 aa16.22■□□□□ 0.19
SYNDIG1-201ENST00000376862 MRPS36P82909 103 aaKnown RBP16.21■□□□□ 0.19
SYNDIG1-201ENST00000376862 TRAV12-2A0A075B6T6 113 aa16.21■□□□□ 0.19
SYNDIG1-201ENST00000376862 DAND5Q8N907 189 aa16.21■□□□□ 0.19
SYNDIG1-201ENST00000376862 SMCR5Q8TEV8 140 aa16.21■□□□□ 0.19
SYNDIG1-201ENST00000376862 ATRXP46100 2492 aa16.21■□□□□ 0.19
SYNDIG1-201ENST00000376862 YAE1D1Q9NRH1 226 aa16.2■□□□□ 0.18
SYNDIG1-201ENST00000376862 LINC00694P0DN24 101 aa16.2■□□□□ 0.18
SYNDIG1-201ENST00000376862 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
SYNDIG1-201ENST00000376862 IGKV3-20P01619 116 aa16.19■□□□□ 0.18
SYNDIG1-201ENST00000376862 VSIG2Q96IQ7 327 aa16.19■□□□□ 0.18
SYNDIG1-201ENST00000376862 ID1P41134 155 aa16.18■□□□□ 0.18
SYNDIG1-201ENST00000376862 C9orf153Q5TBE3 101 aa16.18■□□□□ 0.18
SYNDIG1-201ENST00000376862 C11orf71Q6IPW1 123 aa16.18■□□□□ 0.18
SYNDIG1-201ENST00000376862 SPTBN1Q01082 2364 aaKnown RBP16.18■□□□□ 0.18
SYNDIG1-201ENST00000376862 SPTBN4Q9H254 2564 aa16.17■□□□□ 0.18
SYNDIG1-201ENST00000376862 IMUPQ9GZP8 106 aa16.17■□□□□ 0.18
SYNDIG1-201ENST00000376862 C3orf22Q8N5N4 141 aa16.16■□□□□ 0.18
SYNDIG1-201ENST00000376862 NPFFO15130 113 aa16.16■□□□□ 0.18
SYNDIG1-201ENST00000376862 DCANP1Q8TF63 244 aa16.16■□□□□ 0.18
SYNDIG1-201ENST00000376862 CITED2Q99967 270 aaPredicted RBP16.16■□□□□ 0.18
SYNDIG1-201ENST00000376862 MOB4Q9Y3A3 225 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms