RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MDFICQ9P1T7 246 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 PIFOQ8TCI5 191 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 C10orf105Q8TEF2 133 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 TM2D2Q9BX73 214 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 ODF3BA8MYP8 253 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 NDUFA11Q86Y39 141 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 LINC00310P59036 64 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
PTCH1-203ENST00000375274 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 LINC01548A6NM66 108 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
PTCH1-203ENST00000375274 IGHV4OR15-8A0A075B7B6 117 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 A0A087WW49 117 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 F8WEM9 126 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 CCL24O00175 119 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 A0A0J9YX75 114 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 IGLV2-11P01706 119 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 ARHGAP32A7KAX9 2087 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 USP9YO00507 2555 aaPredicted RBP8.78□□□□□ -1
PTCH1-203ENST00000375274 H3BT86 120 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 TRACP01848 142 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 RBX1P62877 108 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 DSCR8Q96T75 97 aa8.78□□□□□ -1
PTCH1-203ENST00000375274 DSCAMO60469 2012 aa8.77□□□□□ -1
PTCH1-203ENST00000375274 H0YGX0 51 aa8.77□□□□□ -1.01
PTCH1-203ENST00000375274 DAZ2Q13117 558 aaKnown RBP8.77□□□□□ -1.01
PTCH1-203ENST00000375274 DAZ4Q86SG3 579 aaKnown RBP8.77□□□□□ -1.01
PTCH1-203ENST00000375274 VSIG2Q96IQ7 327 aa8.77□□□□□ -1.01
PTCH1-203ENST00000375274 DAZ3Q9NR90 486 aaKnown RBP8.77□□□□□ -1.01
PTCH1-203ENST00000375274 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
PTCH1-203ENST00000375274 IGHV1-58A0A0C4DH39 117 aa8.77□□□□□ -1.01
PTCH1-203ENST00000375274 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 K7EQD1 137 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 TCL1BO95988 128 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 LMO4P61968 165 aa8.76□□□□□ -1.01
PTCH1-203ENST00000375274 ATG2AQ2TAZ0 1938 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 NEXN-AS1Q8NBZ9 246 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 DOPEY1Q5JWR5 2465 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 TRAV25A0A0B4J276 109 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 LGALS9O00182 355 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 CLEC2BQ92478 149 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 C2orf91Q6ZV80 131 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 MAPKAPK5-AS1Q8N8E1 139 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 U3KQK5 164 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
PTCH1-203ENST00000375274 FAM236AA0A1B0GUQ0 79 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 FAM236BA0A1B0GV22 79 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 FSTL3O95633 263 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 IGF1P05019 195 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 SMIM20Q8N5G0 67 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 NKAPP1Q8N9T2 125 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 A0A0J9YY99 117 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 LY6LH3BQJ8 138 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 APOC4P55056 127 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 CEMP1Q6PRD7 247 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-203ENST00000375274 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 HIST2H2BCQ6DN03 193 aa8.74□□□□□ -1.01
PTCH1-203ENST00000375274 EBI3Q14213 229 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 Q6ZQT7 251 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-203ENST00000375274 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 TMEM89A2RUT3 159 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 A6NDX4 124 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 COX7B2Q8TF08 81 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
PTCH1-203ENST00000375274 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 EML5Q05BV3 1969 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 GYPEP15421 78 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 Q6ZUT4 128 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 Q8N976 141 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 NRGNQ92686 78 aa8.72□□□□□ -1.01
PTCH1-203ENST00000375274 PSCAO43653 123 aa8.71□□□□□ -1.01
PTCH1-203ENST00000375274 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
PTCH1-203ENST00000375274 PRO3102Q9H379 93 aa8.71□□□□□ -1.02
PTCH1-203ENST00000375274 ANKRD11Q6UB99 2663 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-203ENST00000375274 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.02
PTCH1-203ENST00000375274 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
PTCH1-203ENST00000375274 IGLV10-54A0A075B6I4 117 aa8.71□□□□□ -1.02
PTCH1-203ENST00000375274 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
PTCH1-203ENST00000375274 MIAQ16674 131 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 LECT2O14960 151 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 P0DMU3 169 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 SPANXCQ9NY87 97 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
PTCH1-203ENST00000375274 ATOX1O00244 68 aa8.69□□□□□ -1.02
PTCH1-203ENST00000375274 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms