RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 OTOFQ9HC10 1997 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 PRB1P04280 392 aa4.96□□□□□ -1.61
UBR4-204ENST00000375254 LINC00467Q9BRT7 94 aa4.96□□□□□ -1.61
UBR4-204ENST00000375254 FSTL3O95633 263 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 ODF3L1Q8IXM7 274 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 IGKV1D-37A0A075B6S9 117 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 SLPIP03973 132 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 LCA10Q71F78 164 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 LINC01547P58512 204 aaPredicted RBP4.96□□□□□ -1.62
UBR4-204ENST00000375254 IGLV2-23P01705 113 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.62
UBR4-204ENST00000375254 TP53BP1Q12888 1972 aaPredicted RBP4.95□□□□□ -1.62
UBR4-204ENST00000375254 DCANP1Q8TF63 244 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 CRIP2P52943 208 aaPredicted RBP4.95□□□□□ -1.62
UBR4-204ENST00000375254 LINC00846Q9NV44 126 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 LINC01356Q8N9X3 169 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 NHLRC4P0CG21 123 aaPredicted RBP4.95□□□□□ -1.62
UBR4-204ENST00000375254 TRBV6-4A0A1B0GX49 114 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 LINC00336Q6ZUF6 198 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
UBR4-204ENST00000375254 C10orf25Q5T742 122 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 C6orf99Q4VX62 202 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 DEFB124Q8NES8 71 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 IGHV3OR16-10A0A075B7F0 116 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 WFDC10BQ8IUB3 73 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 ACYP2P14621 99 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 MYO18BQ8IUG5 2567 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 GYPEP15421 78 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 KIAA1217Q5T5P2 1943 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 PHF3Q92576 2039 aaKnown RBP4.94□□□□□ -1.62
UBR4-204ENST00000375254 TFF1P04155 84 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 IGF1P05019 195 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 BPESC1Q9GZL8 116 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 IFT172Q9UG01 1749 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 ZFAND2AQ8N6M9 145 aa4.94□□□□□ -1.62
UBR4-204ENST00000375254 G3V318 75 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 NWD2Q9ULI1 1742 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 GPR179Q6PRD1 2367 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 LYPD2Q6UXB3 125 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 Q6ZS46 218 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 SPART-AS1P0CW21 52 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 LINC01565O15544 149 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
UBR4-204ENST00000375254 ZNF295-AS1Q8N0V1 137 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 ZNF73O43830 326 aaPredicted RBP4.93□□□□□ -1.62
UBR4-204ENST00000375254 CGB3P0DN86 165 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 CGB7P0DN87 165 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 TPSG1Q9NRR2 321 aa4.93□□□□□ -1.62
UBR4-204ENST00000375254 PIP4P1Q86T03 277 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 PRSS33Q8NF86 280 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 LAMB4A4D0S4 1761 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
UBR4-204ENST00000375254 C14orf177Q52M58 125 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 C7orf65Q6ZTY9 151 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 LOC110117498A0A087WWA1 95 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 PDCD11Q14690 1871 aaKnown RBP4.92□□□□□ -1.62
UBR4-204ENST00000375254 PRAC2D3DTV9 90 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 IGHV7-81A0A0B4J1V7 117 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 Q6ZVQ6 151 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 LRP5O75197 1615 aa4.92□□□□□ -1.62
UBR4-204ENST00000375254 SPRNQ5BIV9 151 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 PKD1L3Q7Z443 1732 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 RIF1Q5UIP0 2472 aaKnown RBP4.91□□□□□ -1.62
UBR4-204ENST00000375254 MYOFQ9NZM1 2061 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 FAM19A1Q7Z5A9 133 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 EML6Q6ZMW3 1958 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 C5P01031 1676 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 ZNF142P52746 1687 aaPredicted RBP4.91□□□□□ -1.62
UBR4-204ENST00000375254 C4AP0C0L4 1744 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 C4BP0C0L5 1744 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 USP54Q70EL1 1684 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 FER1L6Q2WGJ9 1857 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 LTBP4Q8N2S1 1624 aa4.91□□□□□ -1.62
UBR4-204ENST00000375254 PINLYPA6NC86 204 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 MSMBP08118 114 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 KLKP1Q107X0 134 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 URB1-AS1Q96HZ7 61 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 IGKV2D-24A0A075B6R9 120 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 SCN11AQ9UI33 1791 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 E7EQL1 145 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 PROK2Q9HC23 129 aa4.9□□□□□ -1.62
UBR4-204ENST00000375254 Q6ZQY7 126 aa4.9□□□□□ -1.63
UBR4-204ENST00000375254 Q8IZM0 81 aa4.9□□□□□ -1.63
UBR4-204ENST00000375254 AMELXQ99217 191 aa4.9□□□□□ -1.63
UBR4-204ENST00000375254 IGLV4-69A0A075B6H9 119 aa4.89□□□□□ -1.63
UBR4-204ENST00000375254 SONP18583 2426 aaKnown RBP4.89□□□□□ -1.63
UBR4-204ENST00000375254 MYO5AQ9Y4I1 1855 aaKnown RBP4.89□□□□□ -1.63
UBR4-204ENST00000375254 TSHBP01222 138 aa4.89□□□□□ -1.63
UBR4-204ENST00000375254 CHCHD10Q8WYQ3 142 aaPredicted RBP4.89□□□□□ -1.63
UBR4-204ENST00000375254 LINC00575Q6W349 94 aa4.89□□□□□ -1.63
UBR4-204ENST00000375254 BRWD1-AS2P59051 145 aa4.89□□□□□ -1.63
UBR4-204ENST00000375254 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
UBR4-204ENST00000375254 CCL18P55774 89 aa4.89□□□□□ -1.63
UBR4-204ENST00000375254 CDC42SE2Q9NRR3 84 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
UBR4-204ENST00000375254 C22orf34Q6ZV56 151 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms