RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 Q6ZQT7 251 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 KRTAP1-3Q8IUG1 177 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 DCANP1Q8TF63 244 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 LINC01587Q99440 93 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
UBR4-202ENST00000375224 S100A4P26447 101 aaKnown RBP6.17□□□□□ -1.42
UBR4-202ENST00000375224 TAL2Q16559 108 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 C10orf99Q6UWK7 81 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 ODF3Q96PU9 254 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 USP9YO00507 2555 aaPredicted RBP6.17□□□□□ -1.42
UBR4-202ENST00000375224 CRLF1O75462 422 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 NPYP01303 97 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 HBDP02042 147 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
UBR4-202ENST00000375224 PRR9Q5T870 116 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
UBR4-202ENST00000375224 RNASE4P34096 147 aaKnown RBP6.16□□□□□ -1.42
UBR4-202ENST00000375224 LEPP41159 167 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 SRSF9Q13242 221 aaKnown RBP eCLIP6.16□□□□□ -1.42
UBR4-202ENST00000375224 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 IFI27L1Q96BM0 104 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 PTPN13Q12923 2485 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 NAV2Q8IVL1 2488 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 IGHV4OR15-8A0A075B7B6 117 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 A0A087WW49 117 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 J3QKU1 62 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 PRSS1P07477 247 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 HOXD3P31249 432 aaPredicted RBP6.16□□□□□ -1.42
UBR4-202ENST00000375224 SMCPP49901 116 aaPredicted RBP6.16□□□□□ -1.42
UBR4-202ENST00000375224 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
UBR4-202ENST00000375224 KLLNB2CW77 178 aa6.15□□□□□ -1.42
UBR4-202ENST00000375224 K7EQG2 157 aa6.15□□□□□ -1.42
UBR4-202ENST00000375224 PHLDA3Q9Y5J5 127 aa6.15□□□□□ -1.42
UBR4-202ENST00000375224 F6UB75 175 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 UQCRQO14949 82 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 EDN2P20800 178 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 RS1O15537 224 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 Q8N8P6 123 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 ZNRF2Q8NHG8 242 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 PEMTQ9UBM1 199 aa6.15□□□□□ -1.43
UBR4-202ENST00000375224 LINC01619G3V211 115 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 CD7P09564 240 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 CSMD1Q96PZ7 3565 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 CREBBPQ92793 2442 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 PLA2G2AP14555 144 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 PMVKQ15126 192 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 DPH3P1Q9H4G8 78 aa6.14□□□□□ -1.43
UBR4-202ENST00000375224 A0A0J9YX75 114 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 PPP1R17O96001 155 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 DEFB1P60022 68 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 ZNF56Q15929 161 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 WFDC11Q8NEX6 87 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 C4orf3Q8WVX3 66 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 SPANXDQ9BXN6 97 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
UBR4-202ENST00000375224 POLQO75417 2590 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 A0A096LNJ9 63 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 TRPT1Q86TN4 253 aaKnown RBP6.13□□□□□ -1.43
UBR4-202ENST00000375224 KLK5Q9Y337 293 aaPredicted RBP6.13□□□□□ -1.43
UBR4-202ENST00000375224 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
UBR4-202ENST00000375224 TMEM160Q9NX00 188 aa6.13□□□□□ -1.43
UBR4-202ENST00000375224 M0R381 172 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 SLC25A20O43772 301 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 TRACP01848 142 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 DKK2Q9UBU2 259 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 IGKCP01834 107 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 MALP21145 153 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 ZC2HC1BQ5TFG8 222 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 NRACQ8N912 160 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 FOXC2Q99958 501 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 NXPH4O95158 308 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 MORN3Q6PF18 240 aaPredicted RBP6.12□□□□□ -1.43
UBR4-202ENST00000375224 TMEM158Q8WZ71 300 aa6.12□□□□□ -1.43
UBR4-202ENST00000375224 FBN2P35556 2912 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 GNRH2O43555 120 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 RNASE3P12724 160 aaKnown RBP6.11□□□□□ -1.43
UBR4-202ENST00000375224 LAGE3Q14657 143 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 ZFP2Q6ZN57 461 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 CRYBG3Q68DQ2 2970 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 IGLV2-18A0A075B6J9 118 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
UBR4-202ENST00000375224 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
UBR4-202ENST00000375224 FASNP49327 2511 aaKnown RBP6.11□□□□□ -1.43
UBR4-202ENST00000375224 IGKV2D-26A0A0A0MRZ7 120 aa6.11□□□□□ -1.43
UBR4-202ENST00000375224 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms