RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
PHF1-202ENST00000374516 TMEM89A2RUT3 159 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 SYNJ2BPP57105 145 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 HIST2H2BDQ6DRA6 164 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 A0A087WW49 117 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 K7EMT4 169 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
PHF1-202ENST00000374516 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
PHF1-202ENST00000374516 PPP1R17O96001 155 aa12.6□□□□□ -0.39
PHF1-202ENST00000374516 C18orf65Q6ZTR6 163 aa12.6□□□□□ -0.39
PHF1-202ENST00000374516 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
PHF1-202ENST00000374516 ELANEP08246 267 aa12.6□□□□□ -0.39
PHF1-202ENST00000374516 NDUFA11Q86Y39 141 aa12.6□□□□□ -0.39
PHF1-202ENST00000374516 ZNF418Q8TF45 676 aaPredicted RBP12.6□□□□□ -0.39
PHF1-202ENST00000374516 GNRH2O43555 120 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 TSHBP01222 138 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 PTH2Q96A98 100 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 A0A0J9YY99 117 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
PHF1-202ENST00000374516 IGLV4-69A0A075B6H9 119 aa12.58□□□□□ -0.4
PHF1-202ENST00000374516 OVOL1O14753 267 aa12.58□□□□□ -0.4
PHF1-202ENST00000374516 SPINK8P0C7L1 97 aa12.58□□□□□ -0.4
PHF1-202ENST00000374516 MED14OSP0DP75 135 aa12.58□□□□□ -0.4
PHF1-202ENST00000374516 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
PHF1-202ENST00000374516 UBE2E2Q96LR5 201 aa12.58□□□□□ -0.4
PHF1-202ENST00000374516 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
PHF1-202ENST00000374516 FHL3Q13643 280 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 SORL1Q92673 2214 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 RNASE3P12724 160 aaKnown RBP12.57□□□□□ -0.4
PHF1-202ENST00000374516 CRYBA4P53673 196 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 EMP1P54849 157 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
PHF1-202ENST00000374516 LYRM7Q5U5X0 104 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 WFDC12Q8WWY7 111 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
PHF1-202ENST00000374516 TCL1BO95988 128 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 MT-ATP8P03928 68 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 HERVK_113P61574 105 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 PPDPFLQ8WWR9 84 aa12.56□□□□□ -0.4
PHF1-202ENST00000374516 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 CFC1P0CG37 223 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 PMVKQ15126 192 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 Q8N2B8 174 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 DUX3Q96PT4 197 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 IGHV3-30P01768 117 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 IGHV3-30-5P0DP03 117 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 LINC00315P59091 139 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 Q6ZUT4 128 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
PHF1-202ENST00000374516 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 XGP55808 180 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
PHF1-202ENST00000374516 SLURP1P55000 103 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 RPL32P62910 135 aaKnown RBP12.54□□□□□ -0.4
PHF1-202ENST00000374516 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
PHF1-202ENST00000374516 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 ID1P41134 155 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 TSPEAR-AS2P59090 65 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
PHF1-202ENST00000374516 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 TMEM141Q96I45 108 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
PHF1-202ENST00000374516 NXPH4O95158 308 aa12.52□□□□□ -0.41
PHF1-202ENST00000374516 Q6ZSV7 163 aa12.52□□□□□ -0.41
PHF1-202ENST00000374516 VCX2Q9H322 139 aa12.52□□□□□ -0.41
PHF1-202ENST00000374516 A8MWV9 139 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 VCYO14598 125 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 LGALS9O00182 355 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 ZNRF2Q8NHG8 242 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 PRO1854Q9UHT4 67 aa12.51□□□□□ -0.41
PHF1-202ENST00000374516 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
PHF1-202ENST00000374516 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
PHF1-202ENST00000374516 SCGB1C2P0DMR2 95 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 TIMM17AQ99595 171 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 JPT2Q9H910 190 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms