RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NAV3Q8IVL0 2385 aa13.16□□□□□ -0.3
PTPRU-202ENST00000373779 IGHV3-30-3P0DP02 117 aa13.16□□□□□ -0.3
PTPRU-202ENST00000373779 DAZ2Q13117 558 aaKnown RBP13.15□□□□□ -0.31
PTPRU-202ENST00000373779 DAZ4Q86SG3 579 aaKnown RBP13.15□□□□□ -0.31
PTPRU-202ENST00000373779 DAZ3Q9NR90 486 aaKnown RBP13.15□□□□□ -0.31
PTPRU-202ENST00000373779 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
PTPRU-202ENST00000373779 GAS8-AS1O95177 125 aa13.14□□□□□ -0.31
PTPRU-202ENST00000373779 SS18L2Q9UHA2 77 aa13.14□□□□□ -0.31
PTPRU-202ENST00000373779 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
PTPRU-202ENST00000373779 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
PTPRU-202ENST00000373779 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 ODF3Q96PU9 254 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 CENPFP49454 3210 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 CCL24O00175 119 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 A0A0B4J2C4 111 aa13.13□□□□□ -0.31
PTPRU-202ENST00000373779 H3BT86 120 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 DAD1P61803 113 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 CNFNQ9BYD5 112 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 A0A0J9YY99 117 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 TRBV7-3A0A075B6L6 115 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 LGALS9O00182 355 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 CEMP1Q6PRD7 247 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-202ENST00000373779 UBL5Q9BZL1 73 aa13.12□□□□□ -0.31
PTPRU-202ENST00000373779 A0A0J9YXY3 114 aa13.11□□□□□ -0.31
PTPRU-202ENST00000373779 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
PTPRU-202ENST00000373779 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
PTPRU-202ENST00000373779 DOPEY2Q9Y3R5 2298 aa13.11□□□□□ -0.31
PTPRU-202ENST00000373779 XCL1P47992 114 aa13.11□□□□□ -0.31
PTPRU-202ENST00000373779 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 F5H768 121 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 A0A096LPF7 62 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 CRLF1O75462 422 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 RPL32P62910 135 aaKnown RBP13.1□□□□□ -0.31
PTPRU-202ENST00000373779 Q6ZUT4 128 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 MIAQ16674 131 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 C5orf38Q86SI9 138 aa13.1□□□□□ -0.31
PTPRU-202ENST00000373779 PRR9Q5T870 116 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 Q71RC1 249 aaPredicted RBP13.09□□□□□ -0.31
PTPRU-202ENST00000373779 NRGNQ92686 78 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 P0DMU3 169 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
PTPRU-202ENST00000373779 TMEM223A0PJW6 202 aa13.08□□□□□ -0.31
PTPRU-202ENST00000373779 COX7B2Q8TF08 81 aa13.08□□□□□ -0.31
PTPRU-202ENST00000373779 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.32
PTPRU-202ENST00000373779 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
PTPRU-202ENST00000373779 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
PTPRU-202ENST00000373779 ORMDL1Q9P0S3 153 aa13.07□□□□□ -0.32
PTPRU-202ENST00000373779 ANGP03950 147 aaKnown RBP13.07□□□□□ -0.32
PTPRU-202ENST00000373779 K7EQG2 157 aa13.07□□□□□ -0.32
PTPRU-202ENST00000373779 DSCAMO60469 2012 aa13.07□□□□□ -0.32
PTPRU-202ENST00000373779 TMEM61Q8N0U2 210 aa13.07□□□□□ -0.32
PTPRU-202ENST00000373779 MT-ATP8P03928 68 aa13.06□□□□□ -0.32
PTPRU-202ENST00000373779 CLPSL1A2RUU4 121 aa13.06□□□□□ -0.32
PTPRU-202ENST00000373779 H0YGX0 51 aa13.06□□□□□ -0.32
PTPRU-202ENST00000373779 UTRNP46939 3433 aa13.06□□□□□ -0.32
PTPRU-202ENST00000373779 RS1O15537 224 aa13.06□□□□□ -0.32
PTPRU-202ENST00000373779 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 TRAV26-1A0A087WT03 109 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 M0QY20 66 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
PTPRU-202ENST00000373779 HHLA3Q9XRX5 114 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 COL4A2P08572 1712 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 TRACP01848 142 aa13.05□□□□□ -0.32
PTPRU-202ENST00000373779 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
PTPRU-202ENST00000373779 HAMPP81172 84 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 DSCAML1Q8TD84 2053 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 A0A096LNJ9 63 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 FAM236AA0A1B0GUQ0 79 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 FAM236BA0A1B0GV22 79 aa13.03□□□□□ -0.32
PTPRU-202ENST00000373779 APOC4P55056 127 aa13.02□□□□□ -0.32
PTPRU-202ENST00000373779 TRAV25A0A0B4J276 109 aa13.02□□□□□ -0.32
PTPRU-202ENST00000373779 TRBV6-5A0A0K0K1A5 114 aa13.02□□□□□ -0.32
PTPRU-202ENST00000373779 ADAMTS20P59510 1910 aa13.02□□□□□ -0.33
PTPRU-202ENST00000373779 Q6ZQT7 251 aa13.02□□□□□ -0.33
PTPRU-202ENST00000373779 DSCR8Q96T75 97 aa13.02□□□□□ -0.33
PTPRU-202ENST00000373779 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
PTPRU-202ENST00000373779 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
PTPRU-202ENST00000373779 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
PTPRU-202ENST00000373779 COX8CQ7Z4L0 72 aa13.01□□□□□ -0.33
PTPRU-202ENST00000373779 BPTFQ12830 3046 aa13.01□□□□□ -0.33
PTPRU-202ENST00000373779 MUC6Q6W4X9 2439 aa13.01□□□□□ -0.33
PTPRU-202ENST00000373779 CEP350Q5VT06 3117 aa13.01□□□□□ -0.33
PTPRU-202ENST00000373779 GYPEP15421 78 aa13□□□□□ -0.33
PTPRU-202ENST00000373779 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
PTPRU-202ENST00000373779 TMEM126AQ9H061 195 aa13□□□□□ -0.33
PTPRU-202ENST00000373779 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
PTPRU-202ENST00000373779 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
PTPRU-202ENST00000373779 IGHV3-33P01772 117 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms