RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 F6UB75 175 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 UBE2D1P51668 147 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 Q6ZQT7 251 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 XCL2Q9UBD3 114 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 DEFB131AP59861 70 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 HERV-K104P63124 156 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 NDUFA11Q86Y39 141 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 IGHG4P01861 327 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 UBE2D3P61077 147 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 UBE2D2P62837 147 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
RPRD1B-201ENST00000373433 TRAV12-2A0A075B6T6 113 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 CFHR3Q02985 330 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 ORMDL2Q53FV1 153 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 FAM223BA6NKX1 122 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 LINC01619G3V211 115 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 SLC25A20O43772 301 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 FAM223AQ8IWN6 122 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
RPRD1B-201ENST00000373433 SUMO2P61956 95 aaKnown RBP8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 EBI3Q14213 229 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 NEXN-AS1Q8NBZ9 246 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 RASL10AQ92737 203 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TRBV7-9A0A0J9YWB2 115 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE12JA6NER3 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE7O76087 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 GAGE4Q13068 117 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 AJUBAQ96IF1 538 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TEX15Q9BXT5 2789 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TMEM170BQ5T4T1 132 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
RPRD1B-201ENST00000373433 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.05
RPRD1B-201ENST00000373433 IGLV11-55A0A075B6I3 123 aa8.46□□□□□ -1.05
RPRD1B-201ENST00000373433 A6NDX4 124 aa8.46□□□□□ -1.05
RPRD1B-201ENST00000373433 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.05
RPRD1B-201ENST00000373433 HERVK_113P61574 105 aa8.46□□□□□ -1.05
RPRD1B-201ENST00000373433 NHLRC4P0CG21 123 aaPredicted RBP8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 ASIPP42127 132 aa8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 Q6ZS46 218 aa8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 C10orf126Q8N4M7 172 aa8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
RPRD1B-201ENST00000373433 A0A087WWL8 130 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 CRLF1O75462 422 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 CFC1P0CG37 223 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 TOMM6Q96B49 74 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 IGHG2P01859 326 aa8.45□□□□□ -1.06
RPRD1B-201ENST00000373433 GCN1Q92616 2671 aaKnown RBP8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 A0A0J9YY99 117 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 IFITM1P13164 125 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 SLC50A1Q9BRV3 221 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 IGHV3-16A0A0C4DH30 117 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 RHODO00212 210 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 DUSP14O95147 198 aaKnown RBP8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 CTSGP08311 255 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 Q8N6K4 173 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 CITED1Q99966 193 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
RPRD1B-201ENST00000373433 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
RPRD1B-201ENST00000373433 MRAPQ8TCY5 172 aa8.43□□□□□ -1.06
RPRD1B-201ENST00000373433 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 UBE2L6O14933 153 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 Q6YL49 198 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 SMR3AQ99954 134 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
RPRD1B-201ENST00000373433 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 A4D1N5 150 aa8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 C15orf53Q8NAA6 179 aa8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
RPRD1B-201ENST00000373433 ELANEP08246 267 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms