RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
COL17A1-202ENST00000369733 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
COL17A1-202ENST00000369733 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 LECT2O14960 151 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 CRYGBP07316 175 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 CEMP1Q6PRD7 247 aaPredicted RBP12.11□□□□□ -0.47
COL17A1-202ENST00000369733 TMEM61Q8N0U2 210 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
COL17A1-202ENST00000369733 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
COL17A1-202ENST00000369733 Q6ZQT7 251 aa12.1□□□□□ -0.47
COL17A1-202ENST00000369733 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
COL17A1-202ENST00000369733 TRBV7-3A0A075B6L6 115 aa12.1□□□□□ -0.47
COL17A1-202ENST00000369733 A0A0J9YY99 117 aa12.1□□□□□ -0.47
COL17A1-202ENST00000369733 IGHG2P01859 326 aa12.1□□□□□ -0.47
COL17A1-202ENST00000369733 PSMB8P28062 276 aa12.09□□□□□ -0.47
COL17A1-202ENST00000369733 SP5Q6BEB4 398 aaPredicted RBP12.09□□□□□ -0.47
COL17A1-202ENST00000369733 NBL1P41271 181 aa12.09□□□□□ -0.47
COL17A1-202ENST00000369733 Q96MF0 132 aa12.09□□□□□ -0.47
COL17A1-202ENST00000369733 SIRPDQ9H106 197 aa12.09□□□□□ -0.47
COL17A1-202ENST00000369733 Q9HAA7 133 aa12.08□□□□□ -0.48
COL17A1-202ENST00000369733 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
COL17A1-202ENST00000369733 A0A087WW49 117 aa12.08□□□□□ -0.48
COL17A1-202ENST00000369733 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
COL17A1-202ENST00000369733 ATP5G1P05496 136 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 TNCP24821 2201 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 MIR7-3HGQ8N6C7 128 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 A0A0J9YX75 114 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 C16orf74Q96GX8 76 aa12.07□□□□□ -0.48
COL17A1-202ENST00000369733 hADV29S1A0JD25 119 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 JMJD7-PLA2G4BH0Y9G9 81 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 PSCAO43653 123 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 PRB1P04280 392 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 IGF1P05019 195 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
COL17A1-202ENST00000369733 UBE2DNLQ8IWF7 75 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 URB1-AS1Q96HZ7 61 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 MUC22E2RYF6 1773 aaPredicted RBP12.05□□□□□ -0.48
COL17A1-202ENST00000369733 APOC4P55056 127 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 C14orf132Q9NPU4 83 aa12.05□□□□□ -0.48
COL17A1-202ENST00000369733 CCL24O00175 119 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 COX7A2LO14548 114 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 P0DMU3 169 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
COL17A1-202ENST00000369733 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 KIAA1549Q9HCM3 1950 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 GYPEP15421 78 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 IGLV10-54A0A075B6I4 117 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
COL17A1-202ENST00000369733 TRIAP1O43715 76 aa12.03□□□□□ -0.48
COL17A1-202ENST00000369733 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
COL17A1-202ENST00000369733 ATG2AQ2TAZ0 1938 aa12.03□□□□□ -0.48
COL17A1-202ENST00000369733 C22orf34Q6ZV56 151 aa12.02□□□□□ -0.48
COL17A1-202ENST00000369733 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.49
COL17A1-202ENST00000369733 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
COL17A1-202ENST00000369733 NCR3O14931 201 aa12.02□□□□□ -0.49
COL17A1-202ENST00000369733 ADORA2A-AS1P86434 159 aa12.02□□□□□ -0.49
COL17A1-202ENST00000369733 NRACQ8N912 160 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 UQCRQO14949 82 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 C5orf47Q569G3 176 aa12.01□□□□□ -0.49
COL17A1-202ENST00000369733 IGLV4-3A0A075B6K6 122 aa12□□□□□ -0.49
COL17A1-202ENST00000369733 INSL3P51460 131 aa12□□□□□ -0.49
COL17A1-202ENST00000369733 UFSP1Q6NVU6 142 aa12□□□□□ -0.49
COL17A1-202ENST00000369733 HIST2H2BDQ6DRA6 164 aa12□□□□□ -0.49
COL17A1-202ENST00000369733 C10orf105Q8TEF2 133 aa12□□□□□ -0.49
COL17A1-202ENST00000369733 LY6LH3BQJ8 138 aa11.99□□□□□ -0.49
COL17A1-202ENST00000369733 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
COL17A1-202ENST00000369733 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
COL17A1-202ENST00000369733 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
COL17A1-202ENST00000369733 XGP55808 180 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 HCFC1P51610 2035 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
COL17A1-202ENST00000369733 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 TMEM89A2RUT3 159 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 H3BQ85 93 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL17A1-202ENST00000369733 A6NDX4 124 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
COL17A1-202ENST00000369733 M0QY20 66 aa11.96□□□□□ -0.5
COL17A1-202ENST00000369733 C11orf21Q9P2W6 132 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms