RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-202ENST00000368687 LAGE3Q14657 143 aa12.56□□□□□ -0.4
CHTOP-202ENST00000368687 DAZ4Q86SG3 579 aaKnown RBP12.56□□□□□ -0.4
CHTOP-202ENST00000368687 NEXN-AS1Q8NBZ9 246 aa12.56□□□□□ -0.4
CHTOP-202ENST00000368687 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
CHTOP-202ENST00000368687 DAZ3Q9NR90 486 aaKnown RBP12.56□□□□□ -0.4
CHTOP-202ENST00000368687 Q9UF83 564 aa12.56□□□□□ -0.4
CHTOP-202ENST00000368687 URGCP-MRPS24S4R325 110 aa12.56□□□□□ -0.4
CHTOP-202ENST00000368687 PKIAP61925 76 aa12.55□□□□□ -0.4
CHTOP-202ENST00000368687 GTSF1Q8WW33 167 aa12.55□□□□□ -0.4
CHTOP-202ENST00000368687 FRZBQ92765 325 aa12.55□□□□□ -0.4
CHTOP-202ENST00000368687 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
CHTOP-202ENST00000368687 TNP2Q05952 138 aa12.54□□□□□ -0.4
CHTOP-202ENST00000368687 KCNIP4Q6PIL6 250 aa12.54□□□□□ -0.4
CHTOP-202ENST00000368687 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
CHTOP-202ENST00000368687 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
CHTOP-202ENST00000368687 M0QY20 66 aa12.53□□□□□ -0.4
CHTOP-202ENST00000368687 Q6ZRN7 208 aaPredicted RBP12.53□□□□□ -0.4
CHTOP-202ENST00000368687 ISOC2Q96AB3 205 aa12.53□□□□□ -0.4
CHTOP-202ENST00000368687 HERC2O95714 4834 aa12.53□□□□□ -0.4
CHTOP-202ENST00000368687 EREGO14944 169 aa12.52□□□□□ -0.41
CHTOP-202ENST00000368687 RPL23P62829 140 aaKnown RBP12.52□□□□□ -0.41
CHTOP-202ENST00000368687 ADIRFQ15847 76 aa12.52□□□□□ -0.41
CHTOP-202ENST00000368687 SUMO4Q6EEV6 95 aa12.52□□□□□ -0.41
CHTOP-202ENST00000368687 RASL11AQ6T310 242 aa12.52□□□□□ -0.41
CHTOP-202ENST00000368687 TRBV6-8A0A0A6YYG3 113 aa12.51□□□□□ -0.41
CHTOP-202ENST00000368687 HIGD1CA8MV81 97 aa12.51□□□□□ -0.41
CHTOP-202ENST00000368687 C9JQL5 133 aa12.51□□□□□ -0.41
CHTOP-202ENST00000368687 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
CHTOP-202ENST00000368687 A0A087WX48 190 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 A0A1B0GUT8 65 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
CHTOP-202ENST00000368687 ELOBQ15370 118 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 NIT2Q9NQR4 276 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 PKD1P98161 4303 aa12.5□□□□□ -0.41
CHTOP-202ENST00000368687 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
CHTOP-202ENST00000368687 CLLU1Q5K131 121 aa12.49□□□□□ -0.41
CHTOP-202ENST00000368687 NIT1Q86X76 327 aa12.49□□□□□ -0.41
CHTOP-202ENST00000368687 V9GYV3 84 aa12.49□□□□□ -0.41
CHTOP-202ENST00000368687 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
CHTOP-202ENST00000368687 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
CHTOP-202ENST00000368687 TRBV25-1A0A075B6N4 114 aa12.47□□□□□ -0.41
CHTOP-202ENST00000368687 PSCAO43653 123 aa12.47□□□□□ -0.41
CHTOP-202ENST00000368687 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
CHTOP-202ENST00000368687 COX11Q9Y6N1 276 aa12.47□□□□□ -0.41
CHTOP-202ENST00000368687 PNRC1Q12796 327 aaPredicted RBP12.46□□□□□ -0.41
CHTOP-202ENST00000368687 RIGQ13278 110 aa12.46□□□□□ -0.41
CHTOP-202ENST00000368687 RMI2Q96E14 147 aa12.46□□□□□ -0.41
CHTOP-202ENST00000368687 TMEM191AQ9H0A3 160 aa12.45□□□□□ -0.42
CHTOP-202ENST00000368687 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 IGHV1-24A0A0C4DH33 117 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 A0A1B0GW15 77 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 SMIM27A0A1W2PRY6 76 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 PPP1R2P9O14990 202 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 NUP35Q8NFH5 326 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 CHCHD5Q9BSY4 110 aa12.44□□□□□ -0.42
CHTOP-202ENST00000368687 DYNC1H1Q14204 4646 aaKnown RBP12.44□□□□□ -0.42
CHTOP-202ENST00000368687 TMEM262E9PQX1 116 aa12.43□□□□□ -0.42
CHTOP-202ENST00000368687 Q0VG73 95 aa12.43□□□□□ -0.42
CHTOP-202ENST00000368687 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
CHTOP-202ENST00000368687 GATD1Q8NB37 220 aa12.43□□□□□ -0.42
CHTOP-202ENST00000368687 Q9HAA7 133 aa12.43□□□□□ -0.42
CHTOP-202ENST00000368687 C16orf90A8MZG2 172 aa12.42□□□□□ -0.42
CHTOP-202ENST00000368687 COTL1Q14019 142 aa12.42□□□□□ -0.42
CHTOP-202ENST00000368687 UQCC3Q6UW78 93 aa12.42□□□□□ -0.42
CHTOP-202ENST00000368687 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
CHTOP-202ENST00000368687 PGPEP1Q9NXJ5 209 aa12.42□□□□□ -0.42
CHTOP-202ENST00000368687 PPP1R17O96001 155 aa12.41□□□□□ -0.42
CHTOP-202ENST00000368687 S100A8P05109 93 aa12.41□□□□□ -0.42
CHTOP-202ENST00000368687 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
CHTOP-202ENST00000368687 A0A087WTM6 91 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 TRAV26-2A0A0B4J265 109 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 NCR2O95944 276 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 NTM-AS1Q6ZSK4 140 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 Q8N3U1 123 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 KLK12Q9UKR0 248 aa12.4□□□□□ -0.42
CHTOP-202ENST00000368687 CRPP02741 224 aa12.39□□□□□ -0.43
CHTOP-202ENST00000368687 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
CHTOP-202ENST00000368687 IFITM2Q01629 132 aa12.38□□□□□ -0.43
CHTOP-202ENST00000368687 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
CHTOP-202ENST00000368687 ANAPC16Q96DE5 110 aa12.38□□□□□ -0.43
CHTOP-202ENST00000368687 UBE2L6O14933 153 aa12.37□□□□□ -0.43
CHTOP-202ENST00000368687 MT-ND4LP03901 98 aa12.37□□□□□ -0.43
CHTOP-202ENST00000368687 ANGP03950 147 aaKnown RBP12.37□□□□□ -0.43
CHTOP-202ENST00000368687 UBE2WQ96B02 151 aa12.37□□□□□ -0.43
CHTOP-202ENST00000368687 SDHAF1A6NFY7 115 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 F8W036 122 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 RAB4AP20338 218 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 AMTP48728 403 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
CHTOP-202ENST00000368687 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
CHTOP-202ENST00000368687 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms