RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 M0R143 59 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 RHODO00212 210 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 PRSS1P07477 247 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 AZU1P20160 251 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 HNRNPA3P51991 378 aaKnown RBP5.73□□□□□ -1.49
MUC1-209ENST00000368396 RIPPLY3P57055 190 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 RHOHQ15669 191 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 C9orf66Q5T8R8 295 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 CFAP126Q5VTH2 177 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 C2orf66Q6UXQ4 117 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 ZFP2Q6ZN57 461 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 Q6ZN92 141 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 NEGR1Q7Z3B1 354 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 RNASE8Q8TDE3 154 aaKnown RBP5.73□□□□□ -1.49
MUC1-209ENST00000368396 SCGB3A1Q96QR1 104 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 KIR2DL4Q99706 377 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 C2orf88Q9BSF0 95 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 WFDC10AQ9H1F0 79 aa5.73□□□□□ -1.49
MUC1-209ENST00000368396 MRPS16Q9Y3D3 137 aaKnown RBP5.73□□□□□ -1.49
MUC1-209ENST00000368396 A0A087WX48 190 aa5.72□□□□□ -1.49
MUC1-209ENST00000368396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.72□□□□□ -1.49
MUC1-209ENST00000368396 EREGO14944 169 aa5.72□□□□□ -1.49
MUC1-209ENST00000368396 RPL35AP18077 110 aaKnown RBP5.72□□□□□ -1.49
MUC1-209ENST00000368396 ANKRD39Q53RE8 183 aa5.72□□□□□ -1.49
MUC1-209ENST00000368396 CSNK1G2-AS1Q8NCQ2 148 aa5.72□□□□□ -1.49
MUC1-209ENST00000368396 TMEM263Q8WUH6 116 aaKnown RBP5.72□□□□□ -1.49
MUC1-209ENST00000368396 C1QTNF4Q9BXJ3 329 aa5.72□□□□□ -1.49
MUC1-209ENST00000368396 MRPL16Q9NX20 251 aaKnown RBP5.72□□□□□ -1.49
MUC1-209ENST00000368396 IGHV3OR16-12A0A075B7B8 117 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 I3L3M4 83 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 DPM2O94777 84 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 TSHBP01222 138 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 IGHV3-53P01767 116 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 IGKCP01834 107 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 COX8AP10176 69 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 DAZ2Q13117 558 aaKnown RBP5.71□□□□□ -1.5
MUC1-209ENST00000368396 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 Q6ZSN1 163 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 ERASQ7Z444 233 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 NEXN-AS1Q8NBZ9 246 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 SPATA3Q8NHX4 192 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 TMEM141Q96I45 108 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 CYSLTR1Q9Y271 337 aa5.71□□□□□ -1.5
MUC1-209ENST00000368396 NIPBLQ6KC79 2804 aaeCLIP5.71□□□□□ -1.5
MUC1-209ENST00000368396 IGHV3-73A0A0B4J1V6 119 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 PLAC8L1A1L4L8 177 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 IGIPA6NJ69 53 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 FGF6P10767 208 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 STPG4Q8N801 248 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 C16orf74Q96GX8 76 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 DNAJC30Q96LL9 226 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 TIMM17AQ99595 171 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
MUC1-209ENST00000368396 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 TP53TG1Q9Y2A0 90 aa5.7□□□□□ -1.5
MUC1-209ENST00000368396 TRGV1A0A0A0MS02 117 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 TRAV4A0A0B4J268 109 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 F8VRH5 84 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 DLEU1O43261 78 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 P0DMU3 169 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 FAM231AP0DMU4 169 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 FAM231CP0DMU5 169 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 PLNP26678 52 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 RPL39P62891 51 aaKnown RBP5.69□□□□□ -1.5
MUC1-209ENST00000368396 WFDC9Q8NEX5 89 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 OVOL2Q9BRP0 275 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 CHTOPQ9Y3Y2 248 aaKnown RBP5.69□□□□□ -1.5
MUC1-209ENST00000368396 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
MUC1-209ENST00000368396 NACAE9PAV3 2078 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 WIPF1O43516 503 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 RRN3P1Q2M238 152 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 Q6ZTI0 123 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 BOD1L2Q8IYS8 172 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 C20orf203Q8NBC4 194 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 OR4C5Q8NGB2 326 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 JMJD1CQ15652 2540 aa5.68□□□□□ -1.5
MUC1-209ENST00000368396 SIVA1O15304 175 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 CIDEAO60543 219 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 PMVKQ15126 192 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 ZC2HC1BQ5TFG8 222 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 C2orf91Q6ZV80 131 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 DEFB104AQ8WTQ1 72 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 NOP10Q9NPE3 64 aaKnown RBP5.67□□□□□ -1.5
MUC1-209ENST00000368396 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 Q9UF83 564 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 F8P00451 2351 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 TENM1Q9UKZ4 2725 aa5.67□□□□□ -1.5
MUC1-209ENST00000368396 FLNBO75369 2602 aaKnown RBP5.66□□□□□ -1.5
MUC1-209ENST00000368396 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 SMIM9A6NGZ8 99 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 NPSP0C0P6 89 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 COL5A1-AS1Q5SY13 56 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 ZNF479Q96JC4 524 aa5.66□□□□□ -1.5
MUC1-209ENST00000368396 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms