RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 COX7A1P24310 79 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 LSM3P62310 102 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 RPL30P62888 115 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 ZNF678Q5SXM1 525 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 LAIR2Q6ISS4 152 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 CSNK1G2-AS1Q8NCQ2 148 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 OR10G2Q8NGC3 310 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 MUCL1Q96DR8 90 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 CHAC1Q9BUX1 264 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 TNFRSF19Q9NS68 423 aa3.59□□□□□ -1.83
ECHDC1-204ENST00000368292 STAB2Q8WWQ8 2551 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 A0A1B0GW54 56 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 LY6HO94772 140 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 TCL1BO95988 128 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 C1QAP02745 245 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 SFTA3P0C7M3 94 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF688P0C7X2 276 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 PIRTP0C851 137 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 MDKP21741 143 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 FGF12P61328 243 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 CYCSP99999 105 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 PMCHL1Q16048 86 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 CASC10Q5T4H9 136 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 MIC13Q5XKP0 118 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 C15orf53Q8NAA6 179 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF714Q96N38 554 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 NPCDR1Q9BY65 106 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 SCN3AQ9NY46 2000 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 NINQ8N4C6 2090 aa3.58□□□□□ -1.84
ECHDC1-204ENST00000368292 RNASE4P34096 147 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 FAUP35544 74 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 KRTAP10-3P60369 221 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 ZC2HC1BQ5TFG8 222 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 PDPNQ86YL7 162 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 SBSPONQ8IVN8 264 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 Q8N2B8 174 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 CD177Q8N6Q3 437 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 NUP37Q8NFH4 326 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 FAM213BQ8TBF2 198 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 DIRC1Q969H9 104 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 RMI2Q96E14 147 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 C1orf147Q96MC9 270 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 AMELYQ99218 206 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 DPH3P1Q9H4G8 78 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 SND1-IT1Q9HBX3 110 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 HHLA3Q9XRX5 114 aa3.57□□□□□ -1.84
ECHDC1-204ENST00000368292 MUC21A0A140T8X8 626 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 C3orf84H3BNL1 204 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 H3BUT2 72 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 SDCBPO00560 298 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF324O75467 553 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 IGKCP01834 107 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 IL5P05113 134 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 CCL3P10147 92 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF32P17041 273 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 UBE2AP49459 152 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 ATP5EP56381 51 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 BSPH1Q075Z2 132 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 RSPO1Q2MKA7 263 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 ETDBQ3ZM63 59 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 MPV17L2Q567V2 206 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 AMN1Q8IY45 258 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 DAND5Q8N907 189 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 OR2T35Q8NGX2 323 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 FAM104AQ969W3 186 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 HEATR5BQ9P2D3 2071 aa3.56□□□□□ -1.84
ECHDC1-204ENST00000368292 HERC1Q15751 4861 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 TRBV24-1A0A075B6N3 115 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 UBE2L5PA0A1B0GUS4 154 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF736B4DX44 427 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 SYS1-DBNDD2H3BUS1 97 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 ATOX1O00244 68 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 COL8A2P25067 703 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 SSR2P43308 183 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 PCBD1P61457 104 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 UBE2L3P68036 154 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 ELOBQ15370 118 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 XAF1Q6GPH4 301 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF322Q6U7Q0 402 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 ZNF497Q6ZNH5 498 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 OR5AS1Q8N127 324 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 SLC25A29Q8N8R3 303 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 C18orf32Q8TCD1 76 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 MYOZ3Q8TDC0 251 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 LINC00479Q96M42 142 aa3.55□□□□□ -1.84
ECHDC1-204ENST00000368292 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms