RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 Q8N3U1 123 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 DPH3P1Q9H4G8 78 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 NAT8Q9UHE5 227 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 V9GYV3 84 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 A0A087WWC5 75 aa15.14■□□□□ 0.01
ECHDC1-203ENST00000368291 SUMO4Q6EEV6 95 aa15.14■□□□□ 0.01
ECHDC1-203ENST00000368291 PGLYRP4Q96LB8 373 aa15.14■□□□□ 0.01
ECHDC1-203ENST00000368291 TSKUQ8WUA8 353 aa15.13■□□□□ 0.01
ECHDC1-203ENST00000368291 IGHV3-30P01768 117 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 IGHV3-33P01772 117 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 IGHV3-30-3P0DP02 117 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 IGHV3-30-5P0DP03 117 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 RAB14P61106 215 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 C10orf126Q8N4M7 172 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 GFRA4Q9GZZ7 299 aa15.12■□□□□ 0.01
ECHDC1-203ENST00000368291 ADIRFQ15847 76 aa15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 DYNC1H1Q14204 4646 aaKnown RBP15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 FAM231BA6NCW3 169 aa15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 HIGD1CA8MV81 97 aa15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 CLLU1Q5K131 121 aa15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 C15orf54Q8N8G6 183 aa15.11■□□□□ 0.01
ECHDC1-203ENST00000368291 IBA57-AS1B1ANH7 110 aa15.1■□□□□ 0.01
ECHDC1-203ENST00000368291 NFE4Q86UQ8 179 aa15.09■□□□□ 0.01
ECHDC1-203ENST00000368291 NIT1Q86X76 327 aa15.09■□□□□ 0.01
ECHDC1-203ENST00000368291 DNAJC30Q96LL9 226 aa15.09■□□□□ 0.01
ECHDC1-203ENST00000368291 TRBV6-8A0A0A6YYG3 113 aa15.08■□□□□ 0
ECHDC1-203ENST00000368291 H7C1H1 209 aa15.08■□□□□ 0
ECHDC1-203ENST00000368291 RASL11AQ6T310 242 aa15.08■□□□□ 0
ECHDC1-203ENST00000368291 NTM-AS1Q6ZSK4 140 aa15.08■□□□□ 0
ECHDC1-203ENST00000368291 DAZ4Q86SG3 579 aaKnown RBP15.07■□□□□ 0
ECHDC1-203ENST00000368291 DAZ3Q9NR90 486 aaKnown RBP15.07■□□□□ 0
ECHDC1-203ENST00000368291 GATD1Q8NB37 220 aa15.06■□□□□ 0
ECHDC1-203ENST00000368291 NUP35Q8NFH5 326 aa15.06■□□□□ 0
ECHDC1-203ENST00000368291 NIT2Q9NQR4 276 aa15.06■□□□□ 0
ECHDC1-203ENST00000368291 TRAV26-2A0A0B4J265 109 aa15.05■□□□□ -0
ECHDC1-203ENST00000368291 A0A1B0GUT8 65 aa15.05■□□□□ -0
ECHDC1-203ENST00000368291 LAGE3Q14657 143 aa15.03■□□□□ -0
ECHDC1-203ENST00000368291 SMIM15Q7Z3B0 74 aa15.03■□□□□ -0
ECHDC1-203ENST00000368291 BORCS7Q96B45 105 aa15.03■□□□□ -0
ECHDC1-203ENST00000368291 SMIM27A0A1W2PRY6 76 aa15.02■□□□□ -0
ECHDC1-203ENST00000368291 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.02■□□□□ -0
ECHDC1-203ENST00000368291 Q9HAA7 133 aa15.02■□□□□ -0
ECHDC1-203ENST00000368291 TMEM97Q5BJF2 176 aa15.01□□□□□ -0.01
ECHDC1-203ENST00000368291 TMEM191AQ9H0A3 160 aa15.01□□□□□ -0.01
ECHDC1-203ENST00000368291 NAT8BQ9UHF3 227 aa15.01□□□□□ -0.01
ECHDC1-203ENST00000368291 RPL39LQ96EH5 51 aaKnown RBP15□□□□□ -0.01
ECHDC1-203ENST00000368291 CHCHD7Q9BUK0 85 aa15□□□□□ -0.01
ECHDC1-203ENST00000368291 KRTAP10-2P60368 255 aa14.99□□□□□ -0.01
ECHDC1-203ENST00000368291 SPATA12Q7Z6I5 190 aa14.99□□□□□ -0.01
ECHDC1-203ENST00000368291 FRZBQ92765 325 aa14.99□□□□□ -0.01
ECHDC1-203ENST00000368291 RNF185Q96GF1 192 aa14.99□□□□□ -0.01
ECHDC1-203ENST00000368291 URGCP-MRPS24S4R325 110 aa14.99□□□□□ -0.01
ECHDC1-203ENST00000368291 GAS8-AS1O95177 125 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 IQCJQ1A5X6 159 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 A0A087WTM6 91 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 A0A087WX48 190 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 RIGQ13278 110 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 MPV17L2Q567V2 206 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 DEFB104AQ8WTQ1 72 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 CHCHD5Q9BSY4 110 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 KLK12Q9UKR0 248 aa14.98□□□□□ -0.01
ECHDC1-203ENST00000368291 TRBV25-1A0A075B6N4 114 aa14.97□□□□□ -0.01
ECHDC1-203ENST00000368291 TMEM262E9PQX1 116 aa14.97□□□□□ -0.01
ECHDC1-203ENST00000368291 RAB4AP20338 218 aa14.97□□□□□ -0.01
ECHDC1-203ENST00000368291 AMN1Q8IY45 258 aa14.96□□□□□ -0.02
ECHDC1-203ENST00000368291 TRAV8-3A0A0A6YYJ7 113 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 IGHV1-24A0A0C4DH33 117 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 LRCOL1A6NCL2 159 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 PNRC1Q12796 327 aaPredicted RBP14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 KCNIP4Q6PIL6 250 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 ATRAIDQ6UW56 229 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 DNAH5Q8TE73 4624 aa14.95□□□□□ -0.02
ECHDC1-203ENST00000368291 C16orf90A8MZG2 172 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 PSCAO43653 123 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 ADCYAP1P18509 176 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 GAGE6Q13070 117 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 UQCC3Q6UW78 93 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 Q8N976 141 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 LRP1BQ9NZR2 4599 aa14.93□□□□□ -0.02
ECHDC1-203ENST00000368291 TRBV6-5A0A0K0K1A5 114 aa14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 SDHAF1A6NFY7 115 aa14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 FUSP35637 526 aaKnown RBP eCLIP14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 ELOBQ15370 118 aa14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 UBE2WQ96B02 151 aa14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 KIAA1109Q2LD37 5005 aa14.92□□□□□ -0.02
ECHDC1-203ENST00000368291 RPS10P46783 165 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 PKIAP61925 76 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 RBX1P62877 108 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 COTL1Q14019 142 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 ENHOQ6UWT2 76 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 MAPKAPK5-AS1Q8N8E1 139 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 TMEM243Q9BU79 118 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 TM2D2Q9BX73 214 aa14.91□□□□□ -0.02
ECHDC1-203ENST00000368291 A0A1B0GXF2 115 aa14.9□□□□□ -0.02
ECHDC1-203ENST00000368291 PPP1R2P9O14990 202 aa14.9□□□□□ -0.02
ECHDC1-203ENST00000368291 CAMPP49913 170 aa14.9□□□□□ -0.02
ECHDC1-203ENST00000368291 TMEM218A2RU14 115 aa14.89□□□□□ -0.03
ECHDC1-203ENST00000368291 EREGO14944 169 aa14.89□□□□□ -0.03
ECHDC1-203ENST00000368291 ANGP03950 147 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms