RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 HERV-K104P63124 156 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
PTPRK-205ENST00000368213 GTSF1Q8WW33 167 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 FAM167A-AS1Q96KT0 104 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
PTPRK-205ENST00000368213 COL5A1P20908 1838 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-205ENST00000368213 NUP210LQ5VU65 1888 aa8.11□□□□□ -1.11
PTPRK-205ENST00000368213 IGHV4-28A0A0C4DH34 117 aa8.11□□□□□ -1.11
PTPRK-205ENST00000368213 NAA38Q9BRA0 125 aaKnown RBP8.11□□□□□ -1.11
PTPRK-205ENST00000368213 ZFP2Q6ZN57 461 aa8.11□□□□□ -1.11
PTPRK-205ENST00000368213 WNK1Q9H4A3 2382 aa8.11□□□□□ -1.11
PTPRK-205ENST00000368213 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
PTPRK-205ENST00000368213 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 Q6ZS46 218 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 CCL25O15444 150 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
PTPRK-205ENST00000368213 LRCOL1A6NCL2 159 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 A0A1B0GV90 55 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 CRYGBP07316 175 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-205ENST00000368213 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
PTPRK-205ENST00000368213 SOCS3O14543 225 aa8.09□□□□□ -1.12
PTPRK-205ENST00000368213 WFDC10AQ9H1F0 79 aa8.09□□□□□ -1.12
PTPRK-205ENST00000368213 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 LGALS9CQ6DKI2 356 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 TP53TG3Q9ULZ0 132 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 NACAE9PAV3 2078 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 KIR2DL5BA0A0G2JN68 375 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 KIR2DL5BA0A0G2JPC4 375 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 IGHV4-30-4P0DP06 118 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 KIR2DL5AQ8N109 375 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 KIR2DL5BQ8NHK3 375 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 ARHGAP21Q5T5U3 1957 aa8.08□□□□□ -1.12
PTPRK-205ENST00000368213 A0A1W2PPR1 153 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 SIVA1O15304 175 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 CXCL5P42830 114 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.07□□□□□ -1.12
PTPRK-205ENST00000368213 A0A0J9YWU9 116 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 P0DMU3 169 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 TRBV6-1A0A0K0K1D8 114 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 C9JAW5 83 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 REG3AQ06141 175 aa8.07□□□□□ -1.12
PTPRK-205ENST00000368213 NDUFS5O43920 106 aa8.06□□□□□ -1.12
PTPRK-205ENST00000368213 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
PTPRK-205ENST00000368213 Q8N6K4 173 aa8.06□□□□□ -1.12
PTPRK-205ENST00000368213 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-205ENST00000368213 LRP4O75096 1905 aa8.06□□□□□ -1.12
PTPRK-205ENST00000368213 NCOA6Q14686 2063 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-205ENST00000368213 NUPR2A6NF83 97 aa8.06□□□□□ -1.12
PTPRK-205ENST00000368213 MPV17L2Q567V2 206 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 C20orf173Q96LM9 149 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
PTPRK-205ENST00000368213 DKK2Q9UBU2 259 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 NANOS2P60321 138 aaKnown RBP8.05□□□□□ -1.12
PTPRK-205ENST00000368213 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 PRR14LQ5THK1 2151 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 NCR3O14931 201 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
PTPRK-205ENST00000368213 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
PTPRK-205ENST00000368213 INAFM2P0DMQ5 153 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 CHD8Q9HCK8 2581 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 KPRPQ5T749 579 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-205ENST00000368213 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 CEP295Q9C0D2 2601 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 hADV29S1A0JD25 119 aa8.04□□□□□ -1.12
PTPRK-205ENST00000368213 U3KQK5 164 aa8.03□□□□□ -1.12
PTPRK-205ENST00000368213 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
PTPRK-205ENST00000368213 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
PTPRK-205ENST00000368213 BRWD1-AS2P59051 145 aa8.03□□□□□ -1.12
PTPRK-205ENST00000368213 BVES-AS1Q5T3Y7 98 aa8.03□□□□□ -1.12
PTPRK-205ENST00000368213 GDF5OSQ5U4N7 250 aa8.02□□□□□ -1.12
PTPRK-205ENST00000368213 A0A087WZ39 114 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 PRSS47A8MTI9 375 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 FRMD6-AS1P0C7T7 363 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 P0C879 139 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 CTRLP40313 264 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 HAMPP81172 84 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 ZNF747Q9BV97 191 aa8.02□□□□□ -1.13
PTPRK-205ENST00000368213 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
PTPRK-205ENST00000368213 PRO1854Q9UHT4 67 aa8.01□□□□□ -1.13
PTPRK-205ENST00000368213 TLN1Q9Y490 2541 aaKnown RBP8.01□□□□□ -1.13
PTPRK-205ENST00000368213 CHCHD10Q8WYQ3 142 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-205ENST00000368213 RETNQ9HD89 108 aa8.01□□□□□ -1.13
PTPRK-205ENST00000368213 SORL1Q92673 2214 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms