RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RHOHQ15669 191 aa10.32□□□□□ -0.76
USF1-202ENST00000368020 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
USF1-202ENST00000368020 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
USF1-202ENST00000368020 A8MWV9 139 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 M0QY20 66 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 INSP01308 110 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 RIPPLY3P57055 190 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 CD300EQ496F6 205 aaPredicted RBP10.31□□□□□ -0.76
USF1-202ENST00000368020 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
USF1-202ENST00000368020 M0R2P5 195 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 DUX3Q96PT4 197 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 SPXQ9BT56 116 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 JPT2Q9H910 190 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 NSUN5P1Q3KNT7 163 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
USF1-202ENST00000368020 CUBNO60494 3623 aa10.29□□□□□ -0.76
USF1-202ENST00000368020 PROK1P58294 105 aa10.29□□□□□ -0.76
USF1-202ENST00000368020 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
USF1-202ENST00000368020 RHODO00212 210 aa10.28□□□□□ -0.76
USF1-202ENST00000368020 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
USF1-202ENST00000368020 SORL1Q92673 2214 aa10.28□□□□□ -0.76
USF1-202ENST00000368020 CD28P10747 220 aa10.27□□□□□ -0.76
USF1-202ENST00000368020 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.76
USF1-202ENST00000368020 RBMY1BA6NDE4 496 aaKnown RBP10.27□□□□□ -0.77
USF1-202ENST00000368020 RBMY1EA6NEQ0 496 aaKnown RBP10.27□□□□□ -0.77
USF1-202ENST00000368020 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 OR11H12B2RN74 326 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 I3L3M4 83 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 RBMY1DP0C7P1 496 aaKnown RBP10.27□□□□□ -0.77
USF1-202ENST00000368020 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
USF1-202ENST00000368020 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 PMVKQ15126 192 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
USF1-202ENST00000368020 TAL2Q16559 108 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 STHQ8IWL8 128 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
USF1-202ENST00000368020 TAX1BP3O14907 124 aa10.26□□□□□ -0.77
USF1-202ENST00000368020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
USF1-202ENST00000368020 OR11H2Q8NH07 326 aa10.26□□□□□ -0.77
USF1-202ENST00000368020 LINC01587Q99440 93 aa10.26□□□□□ -0.77
USF1-202ENST00000368020 CITED2Q99967 270 aaPredicted RBP10.26□□□□□ -0.77
USF1-202ENST00000368020 CBY1Q9Y3M2 126 aa10.26□□□□□ -0.77
USF1-202ENST00000368020 IGKV2D-26A0A0A0MRZ7 120 aa10.25□□□□□ -0.77
USF1-202ENST00000368020 PRSS29PA6NIE9 313 aa10.25□□□□□ -0.77
USF1-202ENST00000368020 HERVK_113P61574 105 aa10.25□□□□□ -0.77
USF1-202ENST00000368020 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
USF1-202ENST00000368020 PRIMA1Q86XR5 153 aa10.25□□□□□ -0.77
USF1-202ENST00000368020 TRBV25-1A0A075B6N4 114 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 A0A1W2PRX2 142 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 NPSP0C0P6 89 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 CHAC1Q9BUX1 264 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 E9PLD3 99 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 H3BRM9 83 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 HTN1P15515 57 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 PTTG1IPP53801 180 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
USF1-202ENST00000368020 NEGR1Q7Z3B1 354 aa10.24□□□□□ -0.77
USF1-202ENST00000368020 TCTAP57738 103 aa10.23□□□□□ -0.77
USF1-202ENST00000368020 VAMP3Q15836 100 aa10.23□□□□□ -0.77
USF1-202ENST00000368020 BEAN1Q3B7T3 259 aa10.23□□□□□ -0.77
USF1-202ENST00000368020 DNAJC30Q96LL9 226 aa10.23□□□□□ -0.77
USF1-202ENST00000368020 CRYBA4P53673 196 aa10.22□□□□□ -0.77
USF1-202ENST00000368020 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
USF1-202ENST00000368020 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
USF1-202ENST00000368020 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
USF1-202ENST00000368020 TNFRSF18Q9Y5U5 241 aa10.22□□□□□ -0.77
USF1-202ENST00000368020 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.77
USF1-202ENST00000368020 TSHBP01222 138 aa10.21□□□□□ -0.77
USF1-202ENST00000368020 KRTAP24-1Q3LI83 254 aa10.21□□□□□ -0.77
USF1-202ENST00000368020 C11orf44Q8N8P7 122 aa10.21□□□□□ -0.77
USF1-202ENST00000368020 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
USF1-202ENST00000368020 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.78
USF1-202ENST00000368020 TM2D2Q9BX73 214 aa10.21□□□□□ -0.78
USF1-202ENST00000368020 COL6A5A8TX70 2615 aa10.21□□□□□ -0.78
USF1-202ENST00000368020 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
USF1-202ENST00000368020 SAP30O75446 220 aa10.2□□□□□ -0.78
USF1-202ENST00000368020 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
USF1-202ENST00000368020 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
USF1-202ENST00000368020 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
USF1-202ENST00000368020 WNK1Q9H4A3 2382 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 C9orf118A6NHY6 69 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 NACAE9PAV3 2078 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 RS1O15537 224 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 IGLV1-51P01701 117 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 GCSHP23434 173 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 NDUFA11Q86Y39 141 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 CEND1Q8N111 149 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 PRADC1Q9BSG0 188 aa10.19□□□□□ -0.78
USF1-202ENST00000368020 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
USF1-202ENST00000368020 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
USF1-202ENST00000368020 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
USF1-202ENST00000368020 GTF2H5Q6ZYL4 71 aa10.18□□□□□ -0.78
USF1-202ENST00000368020 OR4C5Q8NGB2 326 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms