RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 M0QY20 66 aa13.4□□□□□ -0.26
H3F3A-204ENST00000366816 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
H3F3A-204ENST00000366816 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
H3F3A-204ENST00000366816 FAM74A3Q4VXF1 159 aa13.4□□□□□ -0.26
H3F3A-204ENST00000366816 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
H3F3A-204ENST00000366816 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
H3F3A-204ENST00000366816 CT83Q5H943 113 aa13.39□□□□□ -0.27
H3F3A-204ENST00000366816 NFE4Q86UQ8 179 aa13.39□□□□□ -0.27
H3F3A-204ENST00000366816 ISOC2Q96AB3 205 aa13.39□□□□□ -0.27
H3F3A-204ENST00000366816 IBA57-AS1B1ANH7 110 aa13.38□□□□□ -0.27
H3F3A-204ENST00000366816 ADIRFQ15847 76 aa13.38□□□□□ -0.27
H3F3A-204ENST00000366816 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
H3F3A-204ENST00000366816 SMDT1Q9H4I9 107 aa13.38□□□□□ -0.27
H3F3A-204ENST00000366816 Q9HAA7 133 aa13.38□□□□□ -0.27
H3F3A-204ENST00000366816 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
H3F3A-204ENST00000366816 NAT8Q9UHE5 227 aa13.38□□□□□ -0.27
H3F3A-204ENST00000366816 RAB14P61106 215 aa13.37□□□□□ -0.27
H3F3A-204ENST00000366816 TSKUQ8WUA8 353 aa13.37□□□□□ -0.27
H3F3A-204ENST00000366816 V9GYV3 84 aa13.37□□□□□ -0.27
H3F3A-204ENST00000366816 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
H3F3A-204ENST00000366816 HIGD1CA8MV81 97 aa13.36□□□□□ -0.27
H3F3A-204ENST00000366816 SPATA12Q7Z6I5 190 aa13.36□□□□□ -0.27
H3F3A-204ENST00000366816 NIT1Q86X76 327 aa13.36□□□□□ -0.27
H3F3A-204ENST00000366816 C15orf54Q8N8G6 183 aa13.36□□□□□ -0.27
H3F3A-204ENST00000366816 TRAV26-2A0A0B4J265 109 aa13.35□□□□□ -0.27
H3F3A-204ENST00000366816 H7C1H1 209 aa13.35□□□□□ -0.27
H3F3A-204ENST00000366816 RASL11AQ6T310 242 aa13.35□□□□□ -0.27
H3F3A-204ENST00000366816 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
H3F3A-204ENST00000366816 DYNC1H1Q14204 4646 aaKnown RBP13.35□□□□□ -0.27
H3F3A-204ENST00000366816 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
H3F3A-204ENST00000366816 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
H3F3A-204ENST00000366816 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
H3F3A-204ENST00000366816 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
H3F3A-204ENST00000366816 URGCP-MRPS24S4R325 110 aa13.34□□□□□ -0.27
H3F3A-204ENST00000366816 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.28
H3F3A-204ENST00000366816 IFITM2Q01629 132 aa13.33□□□□□ -0.28
H3F3A-204ENST00000366816 SMIM15Q7Z3B0 74 aa13.33□□□□□ -0.28
H3F3A-204ENST00000366816 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
H3F3A-204ENST00000366816 GATD1Q8NB37 220 aa13.33□□□□□ -0.28
H3F3A-204ENST00000366816 TMEM262E9PQX1 116 aa13.32□□□□□ -0.28
H3F3A-204ENST00000366816 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
H3F3A-204ENST00000366816 NIT2Q9NQR4 276 aa13.32□□□□□ -0.28
H3F3A-204ENST00000366816 A0A087WX48 190 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 A0A1B0GUT8 65 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 FAM231BA6NCW3 169 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 C16orf90A8MZG2 172 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 CHCHD5Q9BSY4 110 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 KLK12Q9UKR0 248 aa13.31□□□□□ -0.28
H3F3A-204ENST00000366816 A0A087WTM6 91 aa13.3□□□□□ -0.28
H3F3A-204ENST00000366816 PSCAO43653 123 aa13.3□□□□□ -0.28
H3F3A-204ENST00000366816 LAGE3Q14657 143 aa13.3□□□□□ -0.28
H3F3A-204ENST00000366816 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
H3F3A-204ENST00000366816 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
H3F3A-204ENST00000366816 MPV17L2Q567V2 206 aa13.28□□□□□ -0.28
H3F3A-204ENST00000366816 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
H3F3A-204ENST00000366816 KCNIP4Q6PIL6 250 aa13.28□□□□□ -0.28
H3F3A-204ENST00000366816 KIAA1109Q2LD37 5005 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 EREGO14944 169 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 GAS8-AS1O95177 125 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 GAGE6Q13070 117 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 Q8N976 141 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 NAT8BQ9UHF3 227 aa13.27□□□□□ -0.29
H3F3A-204ENST00000366816 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
H3F3A-204ENST00000366816 SMIM27A0A1W2PRY6 76 aa13.26□□□□□ -0.29
H3F3A-204ENST00000366816 ATRAIDQ6UW56 229 aa13.26□□□□□ -0.29
H3F3A-204ENST00000366816 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
H3F3A-204ENST00000366816 TMEM191AQ9H0A3 160 aa13.26□□□□□ -0.29
H3F3A-204ENST00000366816 IGHV1-24A0A0C4DH33 117 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 LRCOL1A6NCL2 159 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 RIGQ13278 110 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 IQCJQ1A5X6 159 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 AMN1Q8IY45 258 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
H3F3A-204ENST00000366816 RAB4AP20338 218 aa13.24□□□□□ -0.29
H3F3A-204ENST00000366816 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
H3F3A-204ENST00000366816 ELOBQ15370 118 aa13.23□□□□□ -0.29
H3F3A-204ENST00000366816 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
H3F3A-204ENST00000366816 FRZBQ92765 325 aa13.23□□□□□ -0.29
H3F3A-204ENST00000366816 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
H3F3A-204ENST00000366816 IGKV2D-24A0A075B6R9 120 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 RBX1P62877 108 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 COTL1Q14019 142 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 ENHOQ6UWT2 76 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 PGPEP1Q9NXJ5 209 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 DNAH5Q8TE73 4624 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
H3F3A-204ENST00000366816 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
H3F3A-204ENST00000366816 LECT2O14960 151 aa13.21□□□□□ -0.29
H3F3A-204ENST00000366816 CAMPP49913 170 aa13.21□□□□□ -0.29
H3F3A-204ENST00000366816 WFDC2Q14508 124 aa13.21□□□□□ -0.29
H3F3A-204ENST00000366816 TMEM243Q9BU79 118 aa13.21□□□□□ -0.29
H3F3A-204ENST00000366816 SDHAF1A6NFY7 115 aa13.2□□□□□ -0.3
H3F3A-204ENST00000366816 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
H3F3A-204ENST00000366816 AMTP48728 403 aa13.2□□□□□ -0.3
H3F3A-204ENST00000366816 HERC2O95714 4834 aa13.2□□□□□ -0.3
H3F3A-204ENST00000366816 NCR2O95944 276 aa13.19□□□□□ -0.3
H3F3A-204ENST00000366816 PKIAP61925 76 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms