RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 NDUFA4O00483 81 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 DEFB112Q30KQ8 113 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 C9orf139Q6ZV77 190 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
IFT140-201ENST00000361339 TEX49A0A1B0GTD5 131 aa12.1□□□□□ -0.47
IFT140-201ENST00000361339 SONP18583 2426 aaKnown RBP12.1□□□□□ -0.47
IFT140-201ENST00000361339 MYO9AB2RTY4 2548 aa12.1□□□□□ -0.47
IFT140-201ENST00000361339 ELANEP08246 267 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 NDUFV3P56181 108 aaKnown RBP12.09□□□□□ -0.47
IFT140-201ENST00000361339 LYRM7Q5U5X0 104 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
IFT140-201ENST00000361339 PRO1854Q9UHT4 67 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 TP53TG1Q9Y2A0 90 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 A4D1N5 150 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 C10orf126Q8N4M7 172 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 DUX5Q96PT3 197 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 MUC4Q99102 2169 aa12.09□□□□□ -0.47
IFT140-201ENST00000361339 MRPL53Q96EL3 112 aaKnown RBP12.09□□□□□ -0.47
IFT140-201ENST00000361339 TRBV7-9A0A0J9YWB2 115 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 CRYGDP07320 174 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 COX6B1P14854 86 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 FAM159AQ6UWV7 190 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 JPT2Q9H910 190 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE12JA6NER3 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 F5H697 171 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE7O76087 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE12FP0CL80 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE12GP0CL81 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE12IP0CL82 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 GAGE4Q13068 117 aa12.08□□□□□ -0.48
IFT140-201ENST00000361339 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
IFT140-201ENST00000361339 NPC2P61916 151 aa12.07□□□□□ -0.48
IFT140-201ENST00000361339 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
IFT140-201ENST00000361339 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 Q8N1Y9 231 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 KRTAP10-9P60411 292 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 HERVK_113P61574 105 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 A0A087WWL8 130 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 B4DSR2 109 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 CFHR3Q02985 330 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
IFT140-201ENST00000361339 NF1P21359 2839 aa12.05□□□□□ -0.48
IFT140-201ENST00000361339 IFITM1P13164 125 aa12.05□□□□□ -0.48
IFT140-201ENST00000361339 C15orf53Q8NAA6 179 aa12.05□□□□□ -0.48
IFT140-201ENST00000361339 CITED1Q99966 193 aa12.05□□□□□ -0.48
IFT140-201ENST00000361339 TSHBP01222 138 aa12.05□□□□□ -0.48
IFT140-201ENST00000361339 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
IFT140-201ENST00000361339 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
IFT140-201ENST00000361339 RHODO00212 210 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 PRSS2P07478 247 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
IFT140-201ENST00000361339 LGALS3P17931 250 aaKnown RBP12.04□□□□□ -0.48
IFT140-201ENST00000361339 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 IGLV4-69A0A075B6H9 119 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 TRAV12-2A0A075B6T6 113 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 LINC01619G3V211 115 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
IFT140-201ENST00000361339 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
IFT140-201ENST00000361339 DPH3P1Q9H4G8 78 aa12.03□□□□□ -0.48
IFT140-201ENST00000361339 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
IFT140-201ENST00000361339 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
IFT140-201ENST00000361339 ZNRF2Q8NHG8 242 aa12.03□□□□□ -0.48
IFT140-201ENST00000361339 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
IFT140-201ENST00000361339 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
IFT140-201ENST00000361339 MUSTN1Q8IVN3 82 aa12.03□□□□□ -0.48
IFT140-201ENST00000361339 AKAP9Q99996 3911 aa12.02□□□□□ -0.48
IFT140-201ENST00000361339 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 OVOL1O14753 267 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.49
IFT140-201ENST00000361339 IGHV4-4A0A075B6R2 117 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 J3QQQ9 107 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 ASIPP42127 132 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 VCX2Q9H322 139 aa12.02□□□□□ -0.49
IFT140-201ENST00000361339 PSMB8P28062 276 aa12.01□□□□□ -0.49
IFT140-201ENST00000361339 Q6ZSV7 163 aa12.01□□□□□ -0.49
IFT140-201ENST00000361339 C18orf65Q6ZTR6 163 aa12.01□□□□□ -0.49
IFT140-201ENST00000361339 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
IFT140-201ENST00000361339 SLC25A29Q8N8R3 303 aa12.01□□□□□ -0.49
IFT140-201ENST00000361339 A0A096LNT2 108 aa12□□□□□ -0.49
IFT140-201ENST00000361339 MEIG1Q5JSS6 88 aa12□□□□□ -0.49
IFT140-201ENST00000361339 CHCHD5Q9BSY4 110 aa12□□□□□ -0.49
IFT140-201ENST00000361339 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
IFT140-201ENST00000361339 SYNJ2BPP57105 145 aa12□□□□□ -0.49
IFT140-201ENST00000361339 DUX3Q96PT4 197 aa12□□□□□ -0.49
IFT140-201ENST00000361339 APCP25054 2843 aa12□□□□□ -0.49
IFT140-201ENST00000361339 IGHV3-33P01772 117 aa12□□□□□ -0.49
IFT140-201ENST00000361339 PMVKQ15126 192 aa12□□□□□ -0.49
IFT140-201ENST00000361339 H3BUA1 57 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms