RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PCDH15Q96QU1 1955 aa10.54□□□□□ -0.72
SMC5-201ENST00000361138 DEFB112Q30KQ8 113 aa10.54□□□□□ -0.72
SMC5-201ENST00000361138 MAPK1IP1LQ8NDC0 245 aa10.54□□□□□ -0.72
SMC5-201ENST00000361138 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
SMC5-201ENST00000361138 LY6LH3BQJ8 138 aa10.54□□□□□ -0.72
SMC5-201ENST00000361138 SLURP1P55000 103 aa10.54□□□□□ -0.72
SMC5-201ENST00000361138 DAD1P61803 113 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 NKAPP1Q8N9T2 125 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 IGLV4-3A0A075B6K6 122 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 A0A0J9YX75 114 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 DYSFO75923 2080 aa10.53□□□□□ -0.72
SMC5-201ENST00000361138 INTS1Q8N201 2190 aaKnown RBP10.52□□□□□ -0.72
SMC5-201ENST00000361138 C5orf47Q569G3 176 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 F5H768 121 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 VPREB3Q9UKI3 123 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 LRP4O75096 1905 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 HIST2H2BCQ6DN03 193 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 HIST2H2BDQ6DRA6 164 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 TMEM263Q8WUH6 116 aaKnown RBP10.52□□□□□ -0.73
SMC5-201ENST00000361138 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
SMC5-201ENST00000361138 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 A0A087WW49 117 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 NDUFC2O95298 119 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 ODF3Q96PU9 254 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 H3BQ85 93 aa10.51□□□□□ -0.73
SMC5-201ENST00000361138 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 CNFNQ9BYD5 112 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 C10orf142B7Z368 130 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 Q6ZQT7 251 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 Q6ZS46 218 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 COL5A1P20908 1838 aaPredicted RBP10.5□□□□□ -0.73
SMC5-201ENST00000361138 GPR179Q6PRD1 2367 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
SMC5-201ENST00000361138 NCR3O14931 201 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 CNOT1A5YKK6 2376 aaKnown RBP10.49□□□□□ -0.73
SMC5-201ENST00000361138 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 MED12LQ86YW9 2145 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 NDUFA7O95182 113 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 IMUPQ9GZP8 106 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 PRB1P04280 392 aa10.49□□□□□ -0.73
SMC5-201ENST00000361138 PTPRSQ13332 1948 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 C22orf34Q6ZV56 151 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 M0QY20 66 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 CEP250Q9BV73 2442 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 SPTBN2O15020 2390 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 J3QKU1 62 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 Q6Q795 121 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 NDUFA1O15239 70 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 LINC00308Q8TCZ7 52 aa10.48□□□□□ -0.73
SMC5-201ENST00000361138 CITED2Q99967 270 aaPredicted RBP10.48□□□□□ -0.73
SMC5-201ENST00000361138 SRCAPQ6ZRS2 3230 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 A0A096LNJ9 63 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 FREM1Q5H8C1 2179 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 TRBV27A0A0K0K1C4 114 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 MED13Q9UHV7 2174 aa10.47□□□□□ -0.73
SMC5-201ENST00000361138 TRAV23DV6A0A075B6W5 121 aa10.46□□□□□ -0.73
SMC5-201ENST00000361138 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
SMC5-201ENST00000361138 GOLGB1Q14789 3259 aaKnown RBP10.46□□□□□ -0.73
SMC5-201ENST00000361138 H7C423 109 aa10.46□□□□□ -0.73
SMC5-201ENST00000361138 PRR9Q5T870 116 aa10.46□□□□□ -0.74
SMC5-201ENST00000361138 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
SMC5-201ENST00000361138 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 LST1O00453 97 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 USF3Q68DE3 2245 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 FSTL3O95633 263 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 TECTAO75443 2155 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 TMEM89A2RUT3 159 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 GYPEP15421 78 aa10.45□□□□□ -0.74
SMC5-201ENST00000361138 EBI3Q14213 229 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 SPTA1P02549 2419 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 A6NDX4 124 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 TIMM17BO60830 172 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 TSHBP01222 138 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 RNASE3P12724 160 aaKnown RBP10.44□□□□□ -0.74
SMC5-201ENST00000361138 ADORA2A-AS1P86434 159 aa10.44□□□□□ -0.74
SMC5-201ENST00000361138 HCFC1P51610 2035 aa10.43□□□□□ -0.74
SMC5-201ENST00000361138 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
SMC5-201ENST00000361138 CCL24O00175 119 aa10.43□□□□□ -0.74
SMC5-201ENST00000361138 APOC4P55056 127 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 Q96MF0 132 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 RIF1Q5UIP0 2472 aaKnown RBP10.42□□□□□ -0.74
SMC5-201ENST00000361138 IGHV4-30-2A0A087WSY4 118 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 UBE2D3P61077 147 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 UBE2D2P62837 147 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms