RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 RHODO00212 210 aa15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 HBDP02042 147 aa15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 X6R8D5 127 aa15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 FCER1GP30273 86 aa15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 RPL32P62910 135 aaKnown RBP15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 EDA2RQ9HAV5 297 aa15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 NOP10Q9NPE3 64 aaKnown RBP15.07■□□□□ 0
MAP1LC3A-201ENST00000360668 A0A096LNJ9 63 aa15.06■□□□□ 0
MAP1LC3A-201ENST00000360668 RPL39LQ96EH5 51 aaKnown RBP15.06■□□□□ 0
MAP1LC3A-201ENST00000360668 C20orf202A1L168 122 aa15.05■□□□□ -0
MAP1LC3A-201ENST00000360668 M0QY20 66 aa15.05■□□□□ -0
MAP1LC3A-201ENST00000360668 SUMO2P61956 95 aaKnown RBP15.05■□□□□ -0
MAP1LC3A-201ENST00000360668 DEFB135Q30KP9 77 aa15.05■□□□□ -0
MAP1LC3A-201ENST00000360668 ZFP2Q6ZN57 461 aa15.05■□□□□ -0
MAP1LC3A-201ENST00000360668 Q6ZTI0 123 aa15.04■□□□□ -0
MAP1LC3A-201ENST00000360668 LINC00173Q6ZV60 143 aa15.03■□□□□ -0
MAP1LC3A-201ENST00000360668 VAMP8Q9BV40 100 aa15.03■□□□□ -0
MAP1LC3A-201ENST00000360668 SMIM2Q9BVW6 85 aa15.03■□□□□ -0
MAP1LC3A-201ENST00000360668 NACAE9PAV3 2078 aa15.03■□□□□ -0
MAP1LC3A-201ENST00000360668 TRBV6-5A0A0K0K1A5 114 aa15.02■□□□□ -0
MAP1LC3A-201ENST00000360668 H7C1H1 209 aa15.02■□□□□ -0
MAP1LC3A-201ENST00000360668 LAGE3Q14657 143 aa15.02■□□□□ -0
MAP1LC3A-201ENST00000360668 ST20Q9HBF5 79 aa15.02■□□□□ -0
MAP1LC3A-201ENST00000360668 IGHV3-73A0A0B4J1V6 119 aa15.02□□□□□ -0.01
MAP1LC3A-201ENST00000360668 TRAV4A0A0B4J268 109 aa15.02□□□□□ -0.01
MAP1LC3A-201ENST00000360668 OR4C5Q8NGB2 326 aa15.02□□□□□ -0.01
MAP1LC3A-201ENST00000360668 RNF183Q96D59 192 aa15.02□□□□□ -0.01
MAP1LC3A-201ENST00000360668 OR11H2Q8NH07 326 aa15.01□□□□□ -0.01
MAP1LC3A-201ENST00000360668 PRO1933Q9H354 126 aa15.01□□□□□ -0.01
MAP1LC3A-201ENST00000360668 CIDEAO60543 219 aa14.99□□□□□ -0.01
MAP1LC3A-201ENST00000360668 IGHV3-53P01767 116 aa14.99□□□□□ -0.01
MAP1LC3A-201ENST00000360668 ORMDL2Q53FV1 153 aa14.99□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LINC01545Q5VT33 79 aa14.99□□□□□ -0.01
MAP1LC3A-201ENST00000360668 MIFP14174 115 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 DDTP30046 118 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 POLR2KP53803 58 aaKnown RBP14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 TRAV9-2A0A087WT02 112 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 GAGE12BA1L429 117 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LINC00587B1AMM8 73 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 GAGE7O76087 117 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 GAGE12FP0CL80 117 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 GAGE12GP0CL81 117 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 GAGE12IP0CL82 117 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 G0S2P27469 103 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 EMP1P54849 157 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LINC00612Q8N6U2 182 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 IFI27L1Q96BM0 104 aa14.98□□□□□ -0.01
MAP1LC3A-201ENST00000360668 TRGV2A0A075B6R0 118 aa14.97□□□□□ -0.01
MAP1LC3A-201ENST00000360668 VCYO14598 125 aa14.97□□□□□ -0.01
MAP1LC3A-201ENST00000360668 Q6ZSN1 163 aa14.97□□□□□ -0.01
MAP1LC3A-201ENST00000360668 ZNF479Q96JC4 524 aa14.97□□□□□ -0.01
MAP1LC3A-201ENST00000360668 NOTCH1P46531 2555 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 SDHAF1A6NFY7 115 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LINC01549A6NIU2 74 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 ATP5LO75964 103 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 KPRPQ5T749 579 aaPredicted RBP14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LGALS9CQ6DKI2 356 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 TP53TG1Q9Y2A0 90 aa14.96□□□□□ -0.01
MAP1LC3A-201ENST00000360668 LYRM9A8MSI8 78 aa14.95□□□□□ -0.02
MAP1LC3A-201ENST00000360668 C18orf15Q96N68 181 aa14.95□□□□□ -0.02
MAP1LC3A-201ENST00000360668 IGHV4-28A0A0C4DH34 117 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 TRBV27A0A0K0K1C4 114 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 TCAPO15273 167 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 Q8NAQ8 132 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 PAM16Q9Y3D7 125 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 DNAJC30Q96LL9 226 aa14.94□□□□□ -0.02
MAP1LC3A-201ENST00000360668 SPATA45Q537H7 98 aa14.93□□□□□ -0.02
MAP1LC3A-201ENST00000360668 TNFRSF18Q9Y5U5 241 aa14.93□□□□□ -0.02
MAP1LC3A-201ENST00000360668 NUDT3O95989 172 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 P0DMU3 169 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 DEFA6Q01524 100 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 KIR2DL4Q99706 377 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 MIEN1Q9BRT3 115 aa14.92□□□□□ -0.02
MAP1LC3A-201ENST00000360668 NEGR1Q7Z3B1 354 aa14.91□□□□□ -0.02
MAP1LC3A-201ENST00000360668 NEXN-AS1Q8NBZ9 246 aa14.91□□□□□ -0.02
MAP1LC3A-201ENST00000360668 NBEAL2Q6ZNJ1 2754 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 TRBV10-1A0A0K0K1A3 114 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 K7EQD1 137 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 FAM222AQ5U5X8 452 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 TOMM6Q96B49 74 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 DKK2Q9UBU2 259 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 I3L3M4 83 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 DEFB130BP0DP73 79 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 DEFB130AP0DP74 79 aa14.9□□□□□ -0.02
MAP1LC3A-201ENST00000360668 HSBP1L1C9JCN9 74 aa14.89□□□□□ -0.03
MAP1LC3A-201ENST00000360668 ATOH7Q8N100 152 aa14.89□□□□□ -0.03
MAP1LC3A-201ENST00000360668 TRGV4A0A0C4DH28 118 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 TRBV6-4A0A1B0GX49 114 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 DEFB4AO15263 64 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 IGLC3P0DOY3 106 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 FHL2Q14192 279 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 SLC25A29Q8N8R3 303 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 Q9UF83 564 aa14.87□□□□□ -0.03
MAP1LC3A-201ENST00000360668 K7EIL1 84 aa14.86□□□□□ -0.03
MAP1LC3A-201ENST00000360668 PRSS1P07477 247 aa14.86□□□□□ -0.03
MAP1LC3A-201ENST00000360668 RHOHQ15669 191 aa14.86□□□□□ -0.03
MAP1LC3A-201ENST00000360668 UQCR10Q9UDW1 63 aa14.86□□□□□ -0.03
MAP1LC3A-201ENST00000360668 H0Y8G0 127 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms